Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0782 ATGGGTACTGTTTGCCCTGAAGCTAGCGTGTCAGCGAAGAGGAAGAAGATAGACGTGGTCAGAGAGCTTGTTCAGGGTCACCAATCTGCTTCCCAGCTCAAGTTTCTGCTTCAGAAGCCTTTTGGGGTTGATGGGTTTTCCTCAGCTGATGAACTTCTGGGCAAAATTATTAGATCTTTCACCCACACTCTTTCTATTCTCGCTCCCTCTGACGACGAGGATGGTCAGATTCTGGTTGTTTCCGGTGAGAATGGGTCGCCGGCGGCAGCCTCTTGCCTTGATCGGAGGTCTCAAGATTCAAGCGAGAGTGTGATGAGATCGGCGACCCCTACCAAGAATCGGAGAGGATGCTACAAAAGAAGGAGGACGGGGCAGACATGGACAGTAGTCTCCAACACTGCAGATGACTACCATGCATGGAGAAAGTACGGACAGAAGCAAATCCTCAATTTCAAATTTCCCAGGAGTTACTTGAGGTGCACTCGCAAGCATGACCAAGGTTGTCGGGCAGTCAAACAGGTGCAGCAGATACAAGAAAATCCTGAAACGTACCAGATTACGTACATTGGGTGTCACACATGCAAAGACATCCTCAGGGTTCCCCAAGTGGTCACAGATTCTGGTAATTGGGAATCATTTCTTGCAGACTCAAAGGTTCCAAGTGAAGTACAGGTCCATACCATAAAACAAGAGCATCCCAAAGAGGAGACACCGAGTGATGTTACAGACAACTTGGACCACAGTTTGTGGTCGGATTTGGAAGATTTCGAGCTATCCGAGGCTGCAATTGTGCCCTCAAACATGGGGTCTGATAATGCAGATACTGTGTATTCATATTACGGCTCTTTGGATGTAGGGGTAGATTCTATTCATTTTGCCTCTGATTTCCTCTTCGATGATCCGAGTCCGTTGATTTAG 918 0.4771 MGTVCPEASVSAKRKKIDVVRELVQGHQSASQLKFLLQKPFGVDGFSSADELLGKIIRSFTHTLSILAPSDDEDGQILVVSGENGSPAAASCLDRRSQDSSESVMRSATPTKNRRGCYKRRRTGQTWTVVSNTADDYHAWRKYGQKQILNFKFPRSYLRCTRKHDQGCRAVKQVQQIQENPETYQITYIGCHTCKDILRVPQVVTDSGNWESFLADSKVPSEVQVHTIKQEHPKEETPSDVTDNLDHSLWSDLEDFELSEAAIVPSNMGSDNADTVYSYYGSLDVGVDSIHFASDFLFDDPSPLI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0782 305 ProSiteProfiles WRKY domain profile. 129 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0782 305 SUPERFAMILY WRKY DNA-binding domain 129 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0782 305 Gene3D WRKY domain 116 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0782 305 MobiDBLite consensus disorder prediction 91 110 - -
Dere05g0782 305 Pfam WRKY DNA -binding domain 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0782 305 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 23 231 IPR044810 GO:0003700
Dere05g0782 305 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0782 305 MobiDBLite consensus disorder prediction 86 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0782 Dere-ChrDere05 13334409 13336359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0782 13 221 WRKY Transcription Factor Family AT3G56400 41.232 9.14e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere05g0782 WRKY 7.3e-21 CL0274