Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0781 ATGCCTTGCCAATGTCCAAACTCGGCCTCCATGCTTCGGAGCAGGACACTTCCATTGCTCAACCTCAGAATGTTTTCATCGTCGTCTCCATCGTCCTCTGCTGCCTGCGAAAGTATACTACCCTCCTTTATCAGATCATCTTCTCCAACTCCCAAAATCTCTCTCCCTCATATTCCAGCCCCTCTCTTTTCAAACTCTCAAAATAGCCCACAATTAATGACGCTTTCAAGATGCTGTTCTGGGCTCAGTAGCCCCATTCCCATATCCGGGAAACCCGAATTGCAAAACCTAGAACCCGAATCTGATGACCCTCAGTCGCTTGTGGTGGTGTCCTTCTACAAATTCGCGGATTTCCCTGACCACGCCCACATGAGGAAACCCTTGAAGGGACTCTGTGAAGCACTGCGTGTTTCAGGTGGTATCATTCTTGCGCCTGAAGGAATCAATGGCAGCATATGTGGCACTCGGGAGTCAGTGGAGAAAGTTCTTGCATATATACAAAGTGATAACCGACTAAAGGGGCTAAGACAAGTGGAGTCACCTGTGAGTCCTGAGGAAGAAGCTATTCATCATGGACATAGTGCCAGTTCTCCTCTTGCTGCAGGAGAAGATGCACCCTTTCGATGGGATCATGTGAGGGTTAAGTTGAAGAAAGAGATTGTTACACTTGGGATCCCTACTGTGTCACCTATTGAAAGGGTTGGGAAGTATGTTAGCCCAAGAGATTGGAATACTTTGATTAGTGATCCAGATACAGTGGTGATTGATGTGCGGAACGATTATGAAACCAGAATAGGGAAGTTTAAAGGAGCAGTTGATCCATGTACGACTTCATTTCGTGAATTCCCATCCTGGGTGGAGGATCATTTCCGGCTTACTGGAACCAATTGCAAGCCTCCACCAGTCGAGGTGAACAATTCAGGCGAAAAGGCTGAAAAGGAAACTGAGAGTAGAGAACAACATATGCCACGAGTTGCAATGTATTGCACAGGAGGTATTCGGTGTGAGAAAGCTTCAAGTCTACTCCTCAACAGAGGTTTCAAGGAGGTTTATCACTTGCAAGGTGGAATTCTGAAATACCTCGAAGAAATTCCAAAAACAGAAAGCCTCTGGCAGGGTGAGTGCTTTGTGTTTGACAAGCGAGTCTCTGTGGACCACGGTTTGGTGCAAGGAAATTTCAAGCTTTGCTATGGTTGCAAGCAGCCTGTGAGTGATACTGACATGGAAGCTCCAGAATTTGAATATGGAGTTTCTTGCTCGCACTGCTTCGCACAGAAATCAGATGAAGAGAAGGAGAGAGCCCGAGCCCGGCAAAGACAATTTGAGAGGTGGGGAATCATCGGTGGTCCAGACAAGGGTCGCCGGCTGGCACTTAAACCAGATAATAGTGATAGAAAACCTAACCAGCTTTCACATTCAGTTTAA 1425 0.4674 MPCQCPNSASMLRSRTLPLLNLRMFSSSSPSSSAACESILPSFIRSSSPTPKISLPHIPAPLFSNSQNSPQLMTLSRCCSGLSSPIPISGKPELQNLEPESDDPQSLVVVSFYKFADFPDHAHMRKPLKGLCEALRVSGGIILAPEGINGSICGTRESVEKVLAYIQSDNRLKGLRQVESPVSPEEEAIHHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLGIPTVSPIERVGKYVSPRDWNTLISDPDTVVIDVRNDYETRIGKFKGAVDPCTTSFREFPSWVEDHFRLTGTNCKPPPVEVNNSGEKAEKETESREQHMPRVAMYCTGGIRCEKASSLLLNRGFKEVYHLQGGILKYLEEIPKTESLWQGECFVFDKRVSVDHGLVQGNFKLCYGCKQPVSDTDMEAPEFEYGVSCSHCFAQKSDEEKERARARQRQFERWGIIGGPDKGRRLALKPDNSDRKPNQLSHSV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0781 474 Gene3D - 222 404 IPR036873 -
Dere05g0781 474 SMART rhod_4 238 366 IPR001763 -
Dere05g0781 474 MobiDBLite consensus disorder prediction 179 201 - -
Dere05g0781 474 MobiDBLite consensus disorder prediction 297 317 - -
Dere05g0781 474 MobiDBLite consensus disorder prediction 446 474 - -
Dere05g0781 474 Gene3D - 95 221 - -
Dere05g0781 474 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 217 395 IPR036873 -
Dere05g0781 474 Pfam UPF0176 acylphosphatase like domain 108 220 IPR040503 -
Dere05g0781 474 CDD RHOD_YceA 235 362 - -
Dere05g0781 474 Hamap tRNA uridine(34) hydroxylase [trhO]. 105 406 IPR020936 -
Dere05g0781 474 Pfam Rhodanese-like domain 245 362 IPR001763 -
Dere05g0781 474 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 98 435 IPR020936 -
Dere05g0781 474 ProSiteProfiles Rhodanese domain profile. 248 369 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0781 Dere-ChrDere05 13312882 13316579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0781 103 468 Sulfurtransferasese or Rhodanese AT2G40760 77.174 0.0 592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0781 05 13312882 13316579 Dere05g0781 05 13312882 13316579 ECH