Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0771 ATGAAGTTCGAGTCCTTAATTTTTCCACTTGTTCAACTATGCTTCTTACTATTTTTCTCTGGCTTGGTTATAGCTGATCTGAACTCTGATAGACAAGCTCTCTTTGAGTTTGCTTCTAGTATCCCTCATGCTCGAAGACTCAACTGGAATGATTCTACTCCAATTTGCACCTCATGGATGGGTGTGACTTGCAACTCAAATGGAACTCAGGTCATTGCCATCCATCTTCCAGGAATTGGCCTCAAAGGCCACATTCCAGAAAACACCATAGGAAAACTAGATGCCCTTAGGGTCCTGAGCCTTCACTCCAATGGCCTTAGTGGGAATCTTCCTTCAGACATCCTCTCCATTCCTTCACTCCAATATGTACACCTCCAGCAGAATAACTTCTCAGGTCCAATCCCTCTCTCCGTCTCTCCCAAACTCATTGCACTGGATATTGCCTTTAACTCCTTCTCTGGTACTATACCACCTACATTTGTGAATCTCAGAAGACTCACCTGGTTGTTTTTACAAAACGATTCCATCTCTGGACCTATCCCTGACTTCAACCTCCCAAGGTTGAAATTTCTTAATTTGAGTTATAATAACTTGAGTGGCCCAGTACCAAATTCCATCCAAAAATTTCCTCACACTTCTTTTGTTGGGAACTCTCATTTATGTGGGCCACCTCTAAATCATTGCTCTGCAATCCCCCCTTCTCCATCTCCATCTCCTTCCCCTGCTTACCGGCCACTCTCTCCAGCAAATACCCAAACTCATAAATCTACCAACCCAAAGAAAAAGTTTGGATTAGCTTCTATACTTGCTCTGGCAATTGGGAGCTGTGCATTCCTCTCACTCCTAGTTTTGATAATCTGTTTGTGCTGCTGTAAGAGGAAAAACGGTAATAGTAGTGGCATGCTGAAAGCAAAGGCTGCTTGTGCTGGAAAGACTGAGATTTCTAAGAGTTTTGGGAGTGGGGTGCAAGAGGCTGAGAAGAACAAGTTGTTCTTCTTTAGAGGTTGCTCTTATAGCTTTGACCTTGAGGATTTGTTAAAGGCCTCTGCTGAAGTTCTTGGAAAGGGAAGTTATGGAACAGCTTACAAGGCTGTTCTGGAGGAGGGAACAACAGTGGTGGTTAAGAGGTTGAAGGAGGTTGTGGTTGGAAAGAAGGAGTTTGAGCAGCAGATGGATATTGTGGGCAGATTCGGAGGGCACCCCAATGTCATGCCCCTTCAAGCTTATTACTATTCCAAAGATGAGAAACTTCTAGTTTGCAGCTACATGCCAGGCGGCAGCTTATTTGCCTCTCTGCATGGAAACAGGGGTGCAGGAAGAACTCCATTAGACTGGGATGCAAGAATGAAGATCTCACTCGGCGTTGCCAAAGGAATCGCTTTCCTCCACACTGAAGGGGGTCCCAAATTCACACACGGCAACATCAAGTCCTCCAATGTCCTCCTAACCGAAGACCTCGAAGGCTGCATCTCCGACGTCGGATTGACTCCTCTGATGAACTGTCGAGCAACCATGTCCAGATCCAACGGCTACCGCGCTCCAGAGGTGACTGATTCCCGAAAAATCACCCACAAATCTGATGTCTACAGCTTCGGGGTGGTCCTCCTTGAAATGCTGACGGGGAAATCGCCAATGAGATATCCTGGGCATGAGGACGTGGTGGATCTCCCTAGGTGGGTGAGGTCCGTTGTTCGTGAGGAATGGACGGCGGAAGTTTTCGATGAGGAGCTATTGAGAGGGCGATATGTGGAAGAGGAGATGGTGCAGATGCTTCAGATTGCGCTGGCGTGTGTGATGAAGGTGCCGGATATGAGGCCCACGATGGATGAAGCTGCGAGAATGATAGAGGAAATCAGGCAGCCGGAGTTGAAGACCCGTCCTTCCTCTGAGTCTGAGTCCATCTTGCAAACGCCATGA 1917 0.471 MKFESLIFPLVQLCFLLFFSGLVIADLNSDRQALFEFASSIPHARRLNWNDSTPICTSWMGVTCNSNGTQVIAIHLPGIGLKGHIPENTIGKLDALRVLSLHSNGLSGNLPSDILSIPSLQYVHLQQNNFSGPIPLSVSPKLIALDIAFNSFSGTIPPTFVNLRRLTWLFLQNDSISGPIPDFNLPRLKFLNLSYNNLSGPVPNSIQKFPHTSFVGNSHLCGPPLNHCSAIPPSPSPSPSPAYRPLSPANTQTHKSTNPKKKFGLASILALAIGSCAFLSLLVLIICLCCCKRKNGNSSGMLKAKAACAGKTEISKSFGSGVQEAEKNKLFFFRGCSYSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVVGKKEFEQQMDIVGRFGGHPNVMPLQAYYYSKDEKLLVCSYMPGGSLFASLHGNRGAGRTPLDWDARMKISLGVAKGIAFLHTEGGPKFTHGNIKSSNVLLTEDLEGCISDVGLTPLMNCRATMSRSNGYRAPEVTDSRKITHKSDVYSFGVVLLEMLTGKSPMRYPGHEDVVDLPRWVRSVVREEWTAEVFDEELLRGRYVEEEMVQMLQIALACVMKVPDMRPTMDEAARMIEEIRQPELKTRPSSESESILQTP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0771 638 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Dere05g0771 638 SUPERFAMILY L domain-like 40 225 - -
Dere05g0771 638 MobiDBLite consensus disorder prediction 619 638 - -
Dere05g0771 638 Pfam Leucine Rich Repeat 187 209 IPR001611 GO:0005515
Dere05g0771 638 Gene3D Phosphorylase Kinase; domain 1 313 422 - -
Dere05g0771 638 FunFam pollen receptor-like kinase 1 315 422 - -
Dere05g0771 638 ProSitePatterns Protein kinases ATP-binding region signature. 353 384 IPR017441 GO:0005524
Dere05g0771 638 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0771 638 Gene3D Ribonuclease Inhibitor 140 230 IPR032675 -
Dere05g0771 638 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 629 - -
Dere05g0771 638 FunFam Leucine-rich repeat receptor-like protein kinase 29 139 - -
Dere05g0771 638 FunFam Leucine-rich repeat receptor-like protein kinase 140 228 - -
Dere05g0771 638 SUPERFAMILY Protein kinase-like (PK-like) 351 616 IPR011009 -
Dere05g0771 638 Gene3D Transferase(Phosphotransferase) domain 1 423 635 - -
Dere05g0771 638 Pfam Protein kinase domain 351 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0771 638 Gene3D Ribonuclease Inhibitor 29 139 IPR032675 -
Dere05g0771 638 PANTHER OS05G0588300 PROTEIN 10 629 - -
Dere05g0771 638 CDD STKc_IRAK 353 618 - -
Dere05g0771 638 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0771 Dere-ChrDere05 13231450 13234243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0771 19 633 Receptor kinase-like Gene Family AT5G58300 61.102 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere05g0771 Pkinase 1.9e-34 CL0016