LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere05g0734	ATGGAAAGTGTGAAGGAATGGTTCATGTCGTCACAGGCTGTGATGAGCATGCTAATGGTGCAACTTTTCGCCACTGGGATGCAGATGCTGTCAAGGGTCATATTGGTTCAGGGCACTTTCATTTTTGCACTCATTGCCTATCGTCATGTCGTTGCCACTCTTTGCGTTGCCCCTTTTGCTTTCTACTTCGAAAGAGGCCACGTACAGAGGTTGAGTTGGTCGGTTTGGTTCTGGCTATTCCTCAATGCCTTAGTAGGGATAATAATGGCTATGGGATTTTTCTATTATGGTCTGCGAGACACTTCGGCTACTTACTCTATCAACTTCCTCAACTTGATTCCTATATTCACCTTCTTTGTCTCCATCATGTTCAGGATGGAGAAACTGAATATAAGAACATGGGCTGGTAAAGCCAAGACAGTGGGGGCAATTTTATGTGTTGGAGGAGCATTAACTACTAGTCTTTACAAAGGAAAGGAGTTTTATATTGATCACCATAGTCATCACACTCACACTGCTTCTGCTGAAGCACCCAAAACTCAGATGCTTCAAGGCACTCTCTTTCTAGTTGCTAGCTGCATATCATATACAGCATGGTATATTGTTCAAGTGAAGTTGCTGAAAGCACTTCCATTGAAGTATTTTGTAACGATGATGTCATGTGTTCTGGCATCAATTCAAGCAGCAGTAATAGGGGTATGCATAGATAGGAGTAAAGCTTCTTGGGCTCTAGGCTGGAATCTGCAACTGATCACTATAGTATACTCGGGTGCACTTGCTACAGCTGCTACTTTCTGCTTAATATCTTGGGCAATTGCATTGAAAGGACCTACATATCCCCCAATGTTCAATCCACTGGCTCTTATTTTTGTGGCCTTCTCAGAAGCTTTTCTACTGGGTGAACCACTCAGAGTTGGAACCTTGTTGGGCATGGTTCTGATCGTATCTGGCTTGTACTCCTTTCTGTGGGGTAAAAGGAGGGAGACGCAGAGCTTGCCTCAACCAAATGTTGCAGCTGGTGAAGTATCCACAGGCATGCCTGCTGAATCTGCTGGGTTGCAATCAAAAGCTGTAGTAGTTCCAAGTTCTTCACCCAACATTGCCATCATCGACATTGAAAAGACTGAAGCAATTAGGAAAAACCCTGAACCTTAA	1155	0.4381	MESVKEWFMSSQAVMSMLMVQLFATGMQMLSRVILVQGTFIFALIAYRHVVATLCVAPFAFYFERGHVQRLSWSVWFWLFLNALVGIIMAMGFFYYGLRDTSATYSINFLNLIPIFTFFVSIMFRMEKLNIRTWAGKAKTVGAILCVGGALTTSLYKGKEFYIDHHSHHTHTASAEAPKTQMLQGTLFLVASCISYTAWYIVQVKLLKALPLKYFVTMMSCVLASIQAAVIGVCIDRSKASWALGWNLQLITIVYSGALATAATFCLISWAIALKGPTYPPMFNPLALIFVAFSEAFLLGEPLRVGTLLGMVLIVSGLYSFLWGKRRETQSLPQPNVAAGEVSTGMPAESAGLQSKAVVVPSSSPNIAIIDIEKTEAIRKNPEP	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere05g0734	384	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	246	327	-	-
	Dere05g0734	384	Pfam	EamA-like transporter family	185	321	IPR000620	GO:0016020
	Dere05g0734	384	Pfam	EamA-like transporter family	15	145	IPR000620	GO:0016020
	Dere05g0734	384	PANTHER	WAT1-RELATED PROTEIN	13	329	IPR030184	GO:0016020\|GO:0022857
	Dere05g0734	384	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	47	147	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere05g0734	Dere-ChrDere05	12841173	12843600	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere05g0734	1	330	Nodulin-like Gene Family	AT5G07050	30.294	1.07e-61	202