Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0731 ATGGGTGCGGCTACCACCTGCTATCCGCCGCCGCGCGTGCATGAGACGGCGGTGTTGCCTCTGAATTCGCTGCCGCTGGGGTTCAGATTCCGGCCTACGGACGAGGAGCTTATTGATTACTACCTACGACAGAAGATTAACGGTAATGGTGATGACGTCTGGGTTATTCGGGAAATCGATGTTTGCAAGTGGGAGCCCTGGGATTTGCCTGATTTATCGGTGATACGGAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCGCAGGACCGCAAGTATCCGAATGGCCATCGATTGAACCGAGCAACAACCCAGGGGTATTGGAAGGCCACGGGCAAGGATCGCAAAATTAAGTCTGGGTCCAACTTGATAGGAATGAAGAAAACTTTAGTCTTCTATAGTGGTCGTGCTCCCAGGGGGAAGAGGACCCACTGGGTTATGCATGAGTACCGTCCTACCCTAGAGGAGCTTGATGGTACCAATCCTGGACAGAATGCCTATGTCCTTTGTCGATTGTTTAAGAAACAAGATGAGAGTCTTGAAGGTTCAAACTGTGAAGAAGCAGAGCGGACTGAGTCAACTCCTACCACTGCTAATTACTCTCCGGAAGAAATACAGTCTGATGCAGGTCTGGCTGTGGTATCCCCATCACTGGCTACAGAAGATGATAAGCACATAGTTCCGTTCTGTATGTCCGTGAACACTGGGGAAACTACTTCTAACATAATGGCATCTGTTGATTGCCATAGCGATGGATGTGATGGTTACAATGCACAAAATCAAATGGTAGATAAAAAACCTGCAGAGGAGGATCCGCCGCTGAACCTTGACATATTTAATGAACCAATAACTGAGGCATTTGGTGACAAATTATTCTCCCCACTAAACGTCCATATGCTACCAAAATTTTATGATCCAGTAAGCAGCGAATCAGATGGTCATTGTGGGCTACAACTTCAGTATGGTACAAATGAGACAAATATTTCGGAGTTCTTTGACTCACTTATTAATTGGAGTGAGTTGTCATGTGAGGATTCCATCTGCCAAAAGCCATCCTCCACCATTTTAAATCCCAGGGACATTGGATCAGGGAGCGACTCAGATGTGGAAGTGGCCAATATACCACGTCTGCAAGGATTGAATGCTGCTCCTTCCATGATAGAGACGGCATCAGAATTTTCGAGTACCATCACCTCTGACCTTAGGGGTTATGAGCAGAAGAGCAATATGGGGTTATCCCAAAACAATCCTCAGATGGCTTTGTCATCTGGTGTTGCTTTTGGCCAAGCTTATAATGTATTCAATGGTGATCAGGAACCAAGAAACTATAATACAATTGTTAGTGGTGATAATGGTACTGGAATCAGGATTAGGACTCGCCAAGTTCCAAATGAACAGCTGAACATGAACACTATGATCCAAGGTACTGCACCAAGAAGAATACGTCTACAACTACATGAATCTCTGCTTAGCTCCAATAAACCGGAGAATGATGGGAGTTGTGCACCTGAAAACCATGATTCAAAAACAATTATCGCAAGGGAGACTAAAGCCTCAGAAAATCATGCTGCTGATGAGGATGCTACTGAGTCTGAGGCCGAGAATGAACCCCAGAATTCCGATTCATCTGAAAGCAGGAAGATTTCTCTTCAACTTGTTACCAATGAAGATTCCATCTCAGGGTTGAAAGAGACATTATTCACCTCGAAGGCTTCTTCTCGTGCCACAATCTGGTCGTCTACTTTGGTGTTCTCTGTCAGTTTAGTGGTCTTAGTAGTATTCTTAGCTAACATATGGGGAGTCCTAAAATTTTGA 1812 0.452 MGAATTCYPPPRVHETAVLPLNSLPLGFRFRPTDEELIDYYLRQKINGNGDDVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTQGYWKATGKDRKIKSGSNLIGMKKTLVFYSGRAPRGKRTHWVMHEYRPTLEELDGTNPGQNAYVLCRLFKKQDESLEGSNCEEAERTESTPTTANYSPEEIQSDAGLAVVSPSLATEDDKHIVPFCMSVNTGETTSNIMASVDCHSDGCDGYNAQNQMVDKKPAEEDPPLNLDIFNEPITEAFGDKLFSPLNVHMLPKFYDPVSSESDGHCGLQLQYGTNETNISEFFDSLINWSELSCEDSICQKPSSTILNPRDIGSGSDSDVEVANIPRLQGLNAAPSMIETASEFSSTITSDLRGYEQKSNMGLSQNNPQMALSSGVAFGQAYNVFNGDQEPRNYNTIVSGDNGTGIRIRTRQVPNEQLNMNTMIQGTAPRRIRLQLHESLLSSNKPENDGSCAPENHDSKTIIARETKASENHAADEDATESEAENEPQNSDSSESRKISLQLVTNEDSISGLKETLFTSKASSRATIWSSTLVFSVSLVVLVVFLANIWGVLKF 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0731 603 MobiDBLite consensus disorder prediction 180 200 - -
Dere05g0731 603 Pfam No apical meristem (NAM) protein 25 150 IPR003441 GO:0003677|GO:0006355
Dere05g0731 603 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 242 - -
Dere05g0731 603 Gene3D NAC domain 33 178 IPR036093 GO:0003677|GO:0006355
Dere05g0731 603 MobiDBLite consensus disorder prediction 518 546 - -
Dere05g0731 603 ProSiteProfiles NAC domain profile. 24 174 IPR003441 GO:0003677|GO:0006355
Dere05g0731 603 SUPERFAMILY NAC domain 17 174 IPR036093 GO:0003677|GO:0006355
Dere05g0731 603 FunFam Nac domain-containing protein 86 33 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0731 Dere-ChrDere05 12817633 12820559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0731 17 485 NAC Transcription Factor Family AT4G35580 40.833 1.28e-98 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere05g0731 NAM 1e-35 No_clan