Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0695 ATGCATGAAGTCTTGTATTATGTTGCTTGTGATAGTAGTAATTCTAATTCCGTGGAAGAGCAACTAGAATATGGATTTCAATACTTTCTCTCTGAGTCACTGTTTCTGGATATGGATTCATCTGAGCGAGACGGAAATGGGTCAGAGTACATTCTGCCACCACCTCCTGCTGTCCCACCAAATGTTGTACCAGTGAAAGCAGAACAAGAACTTCCTCCTGAACCCATTAAGAAAAAGGTTTCCCGGGTTCCAATTGCCAGAAGAGGTTTGGGATCCAGAGGAAGTAAAGTATCTCTATTAACTAATCACTTCGAAGTCAATGTTGGTAACAATGAGGGCCACTTCTTCCACTACAGTGTGTCTGTTTCTTATGAAGATGGACGCCCTGTAGAAGGCAAGGGTGCTGGAAGGAAAATAATTGACAGGGTGCAGGAGACTTACAACTCTGAGTTAGCAGGGAAGGACTTTGCGTACGATGGGGAGAAGAGTCTGTTTACTGTCGGACCTCTTCCTCGAAACAAGCTCGAATTCACTGTTGTTCTGGAGGATGTCACATCAAGCCGAAATAATGGCAACTGCAGCCCTGATGCTCATGGGAGTCCAAATGAGAGTGACAGGAAGAGGATGCGGCGCCCAAATCGTTCTAAAACATTTAAAGTGGAGATTAGTTATGCTGCTAAGATTCCTATGCAGGCTATTGCTAATGCACTCCGTGGTCAAGAATCTGAAAATTTCCAAGAAGCCATTAGAGTGCTTGATATCATATTAAGGCAACATGCTGCCAAGCAAGGGTGTTTACTTGTTCGCCAGTCCTTCTTTCACAATGACCCAAGGAATTTTGCTGATGTGGGAGGTGGAGTTCTTGGCTGCAGAGGTTTCCATTCGAGTTTCAGAACTACACAAAGTGGCTTGTCGCTTAACATGGATGTATCAACTACAATGATCATACAACCTGGGCCCGTAGTGGACTTCTTAATTGCGAACCAAAATGTGAGGGATCCTTATTCAGTTGATTGGGCAAAGGCCAAAAGGATGCTTAAAAATCTGAGGATTAAGACTAGCCCAGCCAATCAGGAGTACAAGATAACTGGGCTCAGTGAACTCCCATGCAGAGAGCAGACGTTTTCTCTGAAGAACAAAGGTGGAAAGGATGGTGATGATGGTGCAGAGGAAGTGACTGTTTATGATTATTTTGTTAATTATCGTAAGATAGATCTTCGTTATTCTGCTGATCTTCCATGTATTAATGTTGGGAAACCAAAACGTCCAACCTTCTTCCCTCTTGAGCTTTGCTCTTTGGTATCGTTACAACGATATACAAAATCATTGTCTACCCTTCAAAGGGCTTCACTGGTGGAGAAGTCCAGGCAGAAGCCACAAGAGAGGATGAAAGTTTTGTCTGATACTCTAAAACGCAGCAAGTATGATTCAGAACCCATGCTTCGGAATTGTGGAGTTTCAATAAGCACAGGCTTTACCCAAGTAGAAGGCCGCGTGTTGCAAGCTCCAAGGTTGAAGTTTGGCAATGGGGAGGACTTCAATCCAAGAAATGGGAGATGGAATTTAAATAATAAGAAAATAGTGCAACCAACAAAGATAGAACAATGGGCTGTGGTGAACTTTTCTGCACGCTGTGATACACGAGGGCTTGTACGGGATCTGATTAAATGTGGAGGAATGAAAGGAGTTCTTATAGAAGACCCATTTGATGTTTTTGAAGAAAATCCTCAGTTTAGACGTGCCCCACCTATGGTTAGAGTCGAGAAGATGTTTGAAGAGATTCAGTCTAAACTTCCTGGCCCTCCTAAGTTCCTTCTGTGTCTGCTTTCTGAGCGAAAAAACTCTGATCTTTATGGTCCATGGAAACGGAAGAATCTTGCTGAGTTTGGAGTCGTTACTCAATGCATTGCTCCTACCAGGGTTAATGACCAATATCTCACTAATGTTTTGTTGAAGATTAATGCTAAGCTTGGTGGCCTGAATTCTTTGCTGTCAATTGAACATTCCCCATCTATTCCTGTTGTTTCTAAAGCCCCAACCATCATTCTTGGTATGGATGTGTCCCATGGCTCACCAGGGCAGTCTGATATTCCTTCAATTGCAGCGGTAGTCAGCTCCAGACAGTGGCCTCTGATATCAAAGTATAGGGCATGTGTGCGTACCCAGTCTCCAAAGGTTGAAATGATAGATAATCTGTTCAAGCCAGTGTCTGAGAAGGAGGATGAAGGCATCATCAGGGAACTTTTGATTGACTTTTATTTAAGTTCTGGGAAGAGAAAACCACAAAATATAATCATTTTCAGGGATGGTGTTAGCGAATCACAGTTCAATCAAGTATTGAACATTGAACTAGATCAAATCATTGAGGCCTGTAAGTTTCTTGATGACCAGTGGTCTCCCAAATTTGTTGTAATTGTTGCACAGAAAAACCACCATACAAAATTTTTCCAGCCGACGTCTCCTGACAATGTTCCCCCAGGAACTGTTATTGATAACAAAATTTGTCATCCGCGGAATTATGACTTCTATTTATGTGCACATGCTGGAATGATAGGAACCAGCAGGCCTACTCATTACCATGTTCTGTTAGATGAGGTTGGTTTCTCGGCCCATGATCTTCAGGAACTTGTCCATTCTTTGTCATACGTGTATCAGCGGAGCACCACTGCCATTTCTGTTGTTGCTCCTATATGCTATGCACACTTGGCTGCAACTCAGATGGGGCAGTTCATGAAATTCGAGGATAAGTCTGAGACTTCTTCAAGCCATGGTGGGCTGTCTTCTGCTGGATCAGTTCATGTCCCTCAGTTGCCCAGATTGCAGGAGAACGTCTGCAACTCTATGTTCTTTTGTTGA 2856 0.4314 MHEVLYYVACDSSNSNSVEEQLEYGFQYFLSESLFLDMDSSERDGNGSEYILPPPPAVPPNVVPVKAEQELPPEPIKKKVSRVPIARRGLGSRGSKVSLLTNHFEVNVGNNEGHFFHYSVSVSYEDGRPVEGKGAGRKIIDRVQETYNSELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDVTSSRNNGNCSPDAHGSPNESDRKRMRRPNRSKTFKVEISYAAKIPMQAIANALRGQESENFQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPRNFADVGGGVLGCRGFHSSFRTTQSGLSLNMDVSTTMIIQPGPVVDFLIANQNVRDPYSVDWAKAKRMLKNLRIKTSPANQEYKITGLSELPCREQTFSLKNKGGKDGDDGAEEVTVYDYFVNYRKIDLRYSADLPCINVGKPKRPTFFPLELCSLVSLQRYTKSLSTLQRASLVEKSRQKPQERMKVLSDTLKRSKYDSEPMLRNCGVSISTGFTQVEGRVLQAPRLKFGNGEDFNPRNGRWNLNNKKIVQPTKIEQWAVVNFSARCDTRGLVRDLIKCGGMKGVLIEDPFDVFEENPQFRRAPPMVRVEKMFEEIQSKLPGPPKFLLCLLSERKNSDLYGPWKRKNLAEFGVVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSLLSIEHSPSIPVVSKAPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVSEKEDEGIIRELLIDFYLSSGKRKPQNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDDQWSPKFVVIVAQKNHHTKFFQPTSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDEVGFSAHDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDKSETSSSHGGLSSAGSVHVPQLPRLQENVCNSMFFC 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0695 951 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 75 914 - -
Dere05g0695 951 Gene3D - 671 951 IPR036397 GO:0003676
Dere05g0695 951 SMART DUF1785_2 266 318 IPR014811 -
Dere05g0695 951 MobiDBLite consensus disorder prediction 187 214 - -
Dere05g0695 951 ProSiteProfiles Piwi domain profile. 604 912 IPR003165 GO:0003676
Dere05g0695 951 Pfam Piwi domain 605 912 IPR003165 GO:0003676
Dere05g0695 951 Gene3D - 499 665 - -
Dere05g0695 951 CDD PAZ_argonaute_like 318 434 - -
Dere05g0695 951 Pfam Argonaute linker 2 domain 461 507 IPR032472 -
Dere05g0695 951 Pfam PAZ domain 322 451 IPR003100 GO:0005515
Dere05g0695 951 Pfam Argonaute linker 1 domain 268 316 IPR014811 -
Dere05g0695 951 SUPERFAMILY Ribonuclease H-like 588 910 IPR012337 -
Dere05g0695 951 ProSiteProfiles PAZ domain profile. 360 435 IPR003100 GO:0005515
Dere05g0695 951 SMART Piwi_a_2 604 912 IPR003165 GO:0003676
Dere05g0695 951 Gene3D paz domain 312 439 - -
Dere05g0695 951 Pfam N-terminal domain of argonaute 96 256 IPR032474 -
Dere05g0695 951 FunFam Protein argonaute 3 672 951 - -
Dere05g0695 951 Pfam Mid domain of argonaute 514 548 IPR032473 -
Dere05g0695 951 CDD Piwi_ago-like 479 906 IPR045246 -
Dere05g0695 951 FunFam Protein argonaute 7 313 439 - -
Dere05g0695 951 SUPERFAMILY PAZ domain 313 475 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0695 Dere-ChrDere05 12334740 12352592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0695 87 951 Eukaryotic Initiation Factors Gene Family AT5G43810 36.040 2.74e-169 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0695 05 12334740 12352592 Dere05g0695 05 12334740 12352592 ECH