Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0649 ATGCTGGTTTGCCACGGCGAAAGAGAAGCAAGGGTAGACATAAGAAAGCTTCTTCCAGCTCCTGAACCTGCTTATGACTGCTTGTGGATTCGTGGAGATGCGCAAATCAGCGAGGCGATTATAGACATAAGAAGCTCTTCCAAAGTCCGGTATCACAAGCCAGGCAATGATCATTATCTTCATTTAAGGCCAATACAGAAACCTGATGTGAAGATGAGATGCAAAAGTAAGATCAATGAAGAACCTCAATCTAATATCACAGTTAATGCCCATTTACAGTATCATGGTAGAAACACACTATTGCTTATGCAAGTGCGAATGAGAATGACCACAATCAGACAAAAGCAGGATTATTATGAGGGGCTTGACTTTCGCCGTAGGGTTCAAGCTGAGGTGGGGTGTAGAGGAAGAAGATTTGGGTTTCTTGCTTTCTGCTTCTTCTTCTCGTTGGCTTCAATTTTTCCCAGTGCTAAATCACAATGTGAAGAGACTTGTAATTTAGGTCTTGCTTCGTACTATGTTTGGAATGGTTCGAATCTCACTTACATTTCAGGGATATTGAAATCCGAGCTTCTTTCAACCCCTGACGATATTGTCAGCTACAACAGGGACAAAATACCCAACAAAGACAGCGTTGACGCATTTATAAGAATCAACATTCCCTTCCCATGTCATTGCATTGATAATCAATTTCGAGGTCACAAGTTTCAGTACGATGTTCAGACAGGCGACACCTACGAGAGGGTTGCTACGAGAAACTATGCCAATTTGACCACCGTTGACTGGTTGCGGAAGTTCAATAGCTACCCAGAAGACAATATTCCTGACACTGGAACCTTAAATGTCATGATTAACTGTTCCTGTGGGAATCCCGATGTCTCTAAGGATTATGGGTTGTTCATCACGTACCCACTTAGGCCTGGGGAGACTTTGCAGTCTGTGGCACGCGGGGTGAATCTTGACACGGGATTGCTGCAGAGGTACAATCCCACTGTGAATTTCAACCAGGGAAGTGGTCTGGTTTATATTCCCGGCAAAGTAGCTAATTATGTTAGTGAAAGGGATAATGATGGGTCCATAAGGCCCAAGATAATTCAGGTCTACTCCAGACGGCATAAAGGATCTGAGAAGGGGGAGGGTGCTGAGGGAAATGTTCCTAAGGATCAAAATGCTAGCTATGTGCCACTTCAGTCTAGAGAGGCAGGAGGTCTTCCTGTTGGAGCTATAGTGGGCATATGTGTTGGAGTGGTAGCAGGGCTTCTGTTATTGGCAGTTTGTATTTATGTTATATATTTTCAAAAGAAGGAGGTAGAGGAGGTGAAGTTACTCTCACAAGAATCCAAAGATGCAACCTCTGGTAATGCTGAACATGGAACTTCTGGATCTGTTGGTCCTGTTGCTGGCTTGGCAGCCATTACAGTGGACAAATCAGTGGAGTTCGCATATGAAGAACTGGCCACTGCCACAGATAACTTTAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGTGCTGTTTACTATGCAGAGCTAAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAGGCAACAAGAGAATTTCTAGCTGAATTGAAAGTCCTAACAAATGTTCATCACCTTAATTTGGTGCGTTTGATCGGTTATTGTGTAGAGGGTTCTCTTTTCCTTGTCTATGAGTACATTGAGAATGGAAACTTAAGTCAGCATCTCCGTGGTTCAGGAAGAGACCCACTGCCATGGCCTACAAGGGTGCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCAGTATACATCCATCGTGACATAAAGTCAGCAAATATATTGGTAGACAAAAAATTCCACGGCAAGGTTGCAGATTTTGGATTGACCAAACTGACTGAAGTTGGCAGCTCTTCGCTTCCCACTGGTCGTTTGGTGGGAACATTTGGCTACATGCCTCCAGAATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTCTATGCTTTTGGAGTAGTCCTCTATGAACTCATTTCTGCTAAGGAAGCTATTGTCAAGACAAATGAATCTATTACTGACTCAAAGGGCCTCGTAGCTTTGTTTGAAGGGGTTCTTGATCAGCCTGATCCTTCTGAAGATCTTCGCAAACTGGTGGACCCAAGGCTTGGGAATGACTACCTTATTGATTCAGTTCGCAAGATGGCCCAACTAGCCAAAGCATGCACGCATGACAATCCCCAACTACGTCCAAGTATGAGATCCATTGTTGTTGCTCTCATGACACTTTCATCTGCTACCGAGGATTGGGATGTTGGCTCCTTCTATGAAAATCAAACTCTTGTAAATCTCATGTCAGGAAGGGACGTAGTCTCCGAATTCGTTTTCTACACCGAAACGAAGTCACCATTCCAGCACAAGAAGGCTTTAGATCCTGAAAGGCGAAAGCAAACACAGAGAGAGACAGAGAGGGAGATGGATTTTGAGCTGAGAAGAGCGAGGGAGAAGCTAGAGAGAGAGCAGAAGGAGAGGAAGGAGAAGGCCAGGTTGAAATTGGAGAAGGAAAGGAAGGCTAAACAAGAGGCCAAGATTCAAAGGGAAGCCATTGAAGCTGCTCAACGATCTCGCCGTATCGATGCAGCCGAAGCCCAACTTAAGGCTGATGAACAGATGCAAGAAAGCTTACTTGCTGGAAGAGGTATTGTGTTTTACCGTTTATTAGAAGCTGTACCTTACCAAGGTAATGGTGATAAGATCAAACTGCCACCTTCATGCTTCACGGAATTGTCTGATCAGGGCGCCCTTGATAAGGGGCCCATGTACTTTCAGTTGTCTTTAGTTCATGCGGAGGGTTCTTCAGGCATGAAAGCTACTGATAAAGAGAAGCAAGGGATCACCCATTCAGGAGTTTTAGAATTCACTGCTGATGAAGGTTCAGTAGGTCTTCCTCCTCATGTATGGAATAATTTATTTGCTGAAGTCACTCCAAAGTCTCCATTAGTGGAAGTTCACTATGTTTGGCTTCCAAAAGGGACTTATACAAAACTTCAACCTGAAAGAGTGGGATTTTCTGATTTGCCAAATCATAAGGCTATCCTCGAAACAAGTCTTCGGCAACATGCAACTCTTTCTCAAGGTGATATTTTAACAGTCAACTATGGGGAACTTGCATACAAATTGAGGGTGCTTGAACTAAAACCTTCTTCAAGTGTATCTGTCTTGGAAACAGATATTGAAGTGGACATTGTTGATCCTAATACAGCATCAGAAAAGACAGATCAGCATGTCTTACTCCCACTTGCATTTGGGATGTCACAATCTGGAATGGTTGATCAAGGAAATTTTGGGTACTACAAATTCTCGATAGACAATGGCACCTGGGAGAAAATCATTGCTCAGAATTCCTGTATTGAGGTAAAACTAGAAGCTGAGATAGGTAGTGGAGACACTGATCTTTTTATTTCCAAACATCCTCTTATATTTCCCACCCGACACCAGCATGAGTGGTCATCCCATGACATTGGCTCAAAGGCTTTGATTCTTAGCTTTAATGATATAAACTTTGGGGTTGGGACTTACAGCATTGGAGTATTTGGATTTAAAGGAACAACTAAATACAAAATATCAGTGGCAATTCAGGAGAACTTCCATCAAAAACTGGGTCAACAAGCTTCATCTTCCATGTCATATATGGAGACGGATACTGAACAATGCAGAAATTGCAAGCATTACATACCCAGTCGGACTATTGCATTGCATGAAGCTTACTGTAGCAGACATAATGTTATTTGTCAACATGCTGGTTGTGGAGTTGTTCTCCGGATTGAGGAGTCCAAGAATCACGTTCACTGTGACAGGTGTGGTAAAGCTTTCCAGCAGGGAGAATTGGAAAAGCACATGAAAGTTTTCCATGAGCCTCTTCACTGCCCTTGTGGTGTAGTCCTTGAGAAAGAACAAATGGTTGAACACCAAACTTCAATTTGTCCCTTGCGACTAATTACATGCCGCTTCTGCGGAGACATGGTTCAAGCTGGAAGTTCTGCTGTTGACATCCGAGACAAGATAAGAGGATTAACTGAGCATGAGAGTGTTTGTGGATCCAGGACGGCCCCGTGTGATTCTTGTGGGCGTGCAGTGATGTTGAAGGACATGGACATACACCAGATTGCTGTTCACCAAAAAGGCTAA 4197 0.4336 MLVCHGEREARVDIRKLLPAPEPAYDCLWIRGDAQISEAIIDIRSSSKVRYHKPGNDHYLHLRPIQKPDVKMRCKSKINEEPQSNITVNAHLQYHGRNTLLLMQVRMRMTTIRQKQDYYEGLDFRRRVQAEVGCRGRRFGFLAFCFFFSLASIFPSAKSQCEETCNLGLASYYVWNGSNLTYISGILKSELLSTPDDIVSYNRDKIPNKDSVDAFIRINIPFPCHCIDNQFRGHKFQYDVQTGDTYERVATRNYANLTTVDWLRKFNSYPEDNIPDTGTLNVMINCSCGNPDVSKDYGLFITYPLRPGETLQSVARGVNLDTGLLQRYNPTVNFNQGSGLVYIPGKVANYVSERDNDGSIRPKIIQVYSRRHKGSEKGEGAEGNVPKDQNASYVPLQSREAGGLPVGAIVGICVGVVAGLLLLAVCIYVIYFQKKEVEEVKLLSQESKDATSGNAEHGTSGSVGPVAGLAAITVDKSVEFAYEELATATDNFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGRDPLPWPTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILVDKKFHGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAIVKTNESITDSKGLVALFEGVLDQPDPSEDLRKLVDPRLGNDYLIDSVRKMAQLAKACTHDNPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQTLVNLMSGRDVVSEFVFYTETKSPFQHKKALDPERRKQTQRETEREMDFELRRAREKLEREQKERKEKARLKLEKERKAKQEAKIQREAIEAAQRSRRIDAAEAQLKADEQMQESLLAGRGIVFYRLLEAVPYQGNGDKIKLPPSCFTELSDQGALDKGPMYFQLSLVHAEGSSGMKATDKEKQGITHSGVLEFTADEGSVGLPPHVWNNLFAEVTPKSPLVEVHYVWLPKGTYTKLQPERVGFSDLPNHKAILETSLRQHATLSQGDILTVNYGELAYKLRVLELKPSSSVSVLETDIEVDIVDPNTASEKTDQHVLLPLAFGMSQSGMVDQGNFGYYKFSIDNGTWEKIIAQNSCIEVKLEAEIGSGDTDLFISKHPLIFPTRHQHEWSSHDIGSKALILSFNDINFGVGTYSIGVFGFKGTTKYKISVAIQENFHQKLGQQASSSMSYMETDTEQCRNCKHYIPSRTIALHEAYCSRHNVICQHAGCGVVLRIEESKNHVHCDRCGKAFQQGELEKHMKVFHEPLHCPCGVVLEKEQMVEHQTSICPLRLITCRFCGDMVQAGSSAVDIRDKIRGLTEHESVCGSRTAPCDSCGRAVMLKDMDIHQIAVHQKG 1398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0649 1398 Gene3D - 1013 1086 - -
Dere05g0649 1398 MobiDBLite consensus disorder prediction 808 830 - -
Dere05g0649 1398 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Dere05g0649 1398 FunFam PTI1-like tyrosine-protein kinase 3 563 777 - -
Dere05g0649 1398 Gene3D - 906 1011 IPR042299 -
Dere05g0649 1398 Pfam Ubiquitin fusion degradation protein UFD1 918 1088 IPR004854 GO:0006511
Dere05g0649 1398 CDD UDM1_RNF168_RNF169-like 832 893 - -
Dere05g0649 1398 ProSiteProfiles Protein kinase domain profile. 492 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0649 1398 Pfam Protein tyrosine and serine/threonine kinase 494 762 IPR001245 GO:0004672|GO:0006468
Dere05g0649 1398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Dere05g0649 1398 SMART serkin_6 492 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0649 1398 Gene3D Phosphorylase Kinase; domain 1 468 562 - -
Dere05g0649 1398 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1306 1353 IPR013083 -
Dere05g0649 1398 SUPERFAMILY Protein kinase-like (PK-like) 476 763 IPR011009 -
Dere05g0649 1398 Coils Coil 826 878 - -
Dere05g0649 1398 Gene3D Transferase(Phosphotransferase) domain 1 563 786 - -
Dere05g0649 1398 FunFam LysM receptor kinase 2 471 562 - -
Dere05g0649 1398 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 145 781 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0649 Dere-ChrDere05 10767012 10789970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0649 141 791 Receptor kinase-like Gene Family AT3G21630 55.235 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere05g0649 PK_Tyr_Ser-Thr 2.8e-44 CL0016
TF C2H2 Dere05g0649 PK_Tyr_Ser-Thr 2.8e-44 CL0016