LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere05g0613	ATGAAGCAGAACTTATCGAAGATGTTGTTCGAGTGTCATGGGAGCAAATTGCGTTCTAAATTGCCATCTTATAATGGCACACTAGTTGGCATTGACTCCAGGTTAGATGCAATTGATTCAGTCCTAGGAATAGGGTTGAATGATGTTCGCTTTGTAGGGATATGGGGCATGGGTGGTATCAGTAACGAACGCAATACAAGTGCCTTGAAAGTTCTTCAGTGGAGGGAATATCCTCTAAAAACTCTTCCTCCTGGAACCCAACTAGATAAACTCATTGATCTTAAAATGCGTTATAGCAAAATAAAGGAACTTCTGAATAAAAGCCAGTGTTTGGAGAATCTAAAGTTTCTGGACCTGAGCCATTCCAAATACTCAATTAAAACGCCAAATTTTTCTGGACTTCCAAATCTAGAAAGATTAACTCTTAAAGTATGTGTAAGTCTTGTTGAGCTTCATCCTTCGCTTGGACAGCATAAAAAGCTTCTCGTGTTGAATTTGAAAGGCTGCATAAATCTTAAATTCCTTCCTAGAAAATTGGAAATGACTTCTCTTAAGGAATTTGTTCTAGAGGAGACTGGTATAGAAGAAGTTCCTAAGTCACTTGGATTCTTGACTAGTGTTGAAGTTTTGAATATAAGGGGATGCAAAAATCTTAAAGTCCTTCCAAGAGTATTGGAAATGAATTCGCTGAAGGAATTTATTCTTTGTGGGTGCACTCAATTAAGAAATCTTCCAGAGTTCGGAGAAAATATGGAAAATCTAAGGCATTCATCTCCTAAGGGCTTAGTATTGCCTTCTTCTATCGTCAATCTTAAATCATTGACAGAATTAAATTTAAGCTACTGCAATATTGATGATGGATTCATTCCTGATGATCTTGGTAGCTTATCATCACTACGGAAATTAGATCTAAGAGGAAACATGTTTGTGAATCTACCTGCTGGCTGCATTTCTTATCTTTTGGACCTAAGACATCTTTATTTGAACTTCTGCCCAAGGCTTCAGTCATTGCCGCAGCCTTCACCAAAATTACTATTTATAACTGCAGGAGACTCTGTTTCAATGGAACTTTTGTCAGACAAACAATTATCACATCTCTTTGGCTCAATTGACCAGCATGGCCAATATGCTGATAGGATACAGTATGTTACATCGGATGATGATAAAAGGGCATCATTGTTAGTCAAAAACTTCACAATCACAATTCCAGGGACTGAAATACCATCGTGGTTCGAGAACCAAAATGATCTTCTTCTGCATGAGGATTTTTCAGGTTCAATAATAATAGACGTCCCTCCATGTGAATGGTTGGGATTTGGGTTATGCATAGTGCTAGATGATAGGTTTTACTCCACAGAGGCCAACCGGCCAAAATTTCGTTCGCCCATCTGGCGTCAATATATTGCTAAAGCTTCTGATGGAGAGTTTTTAATGCTTCGAATTAGGTTACGTAAAATTGAGAAAGAAATATATTCTCCTCACCTTTGGATCCTTTTCGGGCAAATTAGAGAGATAAATGGTTTGAAATTATCAATGAATTACAGCCAGCTTTGTCTGACATCTGTAGCTGATTTTGGTCATAACGCTTGGCCGATGGATAAAAAAAATAATGGAATAGTTTCAGTGAAGTGTGGATGGCGTGTCACAAGCAAAGCAGACTTTGAAGAGTGGGGAAAAACAATGAGTGAAATTCACCTTCCAATATTGAAAGAGCACAAGGAGGGGGAAAATGGAAAATGCTCTGAAGCTGAAGAGCAAGGGCAATGCAGTTTGTCATTAATTGAGAGCTCCCAGACAACAATCGATGAATGTGAAACCATGCCTCCAGAGCCATCATCTCCATGCTCAGAAGAAGGCAAATTAGATGATTCATGGATGCAGTTCACTACAGACGACGCACGGTACTGGATATGA	1914	0.3877	MKQNLSKMLFECHGSKLRSKLPSYNGTLVGIDSRLDAIDSVLGIGLNDVRFVGIWGMGGISNERNTSALKVLQWREYPLKTLPPGTQLDKLIDLKMRYSKIKELLNKSQCLENLKFLDLSHSKYSIKTPNFSGLPNLERLTLKVCVSLVELHPSLGQHKKLLVLNLKGCINLKFLPRKLEMTSLKEFVLEETGIEEVPKSLGFLTSVEVLNIRGCKNLKVLPRVLEMNSLKEFILCGCTQLRNLPEFGENMENLRHSSPKGLVLPSSIVNLKSLTELNLSYCNIDDGFIPDDLGSLSSLRKLDLRGNMFVNLPAGCISYLLDLRHLYLNFCPRLQSLPQPSPKLLFITAGDSVSMELLSDKQLSHLFGSIDQHGQYADRIQYVTSDDDKRASLLVKNFTITIPGTEIPSWFENQNDLLLHEDFSGSIIIDVPPCEWLGFGLCIVLDDRFYSTEANRPKFRSPIWRQYIAKASDGEFLMLRIRLRKIEKEIYSPHLWILFGQIREINGLKLSMNYSQLCLTSVADFGHNAWPMDKKNNGIVSVKCGWRVTSKADFEEWGKTMSEIHLPILKEHKEGENGKCSEAEEQGQCSLSLIESSQTTIDECETMPPEPSSPCSEEGKLDDSWMQFTTDDARYWI	637

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere05g0613	637	Gene3D	Ribonuclease Inhibitor	56	175	IPR032675	-
	Dere05g0613	637	Gene3D	Ribonuclease Inhibitor	176	260	IPR032675	-
	Dere05g0613	637	Gene3D	Ribonuclease Inhibitor	261	417	IPR032675	-
	Dere05g0613	637	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	67	223	IPR044974	GO:0006952
	Dere05g0613	637	Pfam	Leucine Rich Repeat	273	296	IPR001611	GO:0005515
	Dere05g0613	637	SUPERFAMILY	L domain-like	40	348	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere05g0613	Dere-ChrDere05	10026613	10031447	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere05g0613	67	326	WRKY Transcription Factor Family	AT4G12020	33.333	1.08e-19	92.4