Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0610 ATGGAAATCATATACATGGCATTATTGTGGCTTTTTCTGGCAACTCATATCCTAGTGGTCCTTGGCATTAATATCCCAGCAGTGATAGTTTTTGGAGACTCCTCTGTGGATACTGGAAACAACAATGTGATCGCCACGGTGCTCAAGAGCAACTTCCGGCCTTACGGCCGGGACTTCGAGGGCGGCCGTGCCACCGGTCGCTTCTCCAACGGCCGTGTCCCGCCGGACTTGATCTCCGAGGCTTTTGGTCTTAAACGCACCGTTCCTGCCTACTTGGATTCCTCGTATTCCATCAAAGATTTTGCCACTGGGGTTAACTTTGCCTCAGCTGGAACTGGATATGATAACAAAACTGCTTCTGTACTAAATGTGATACCACTATGGAAGGAGCTGGAGTACTACAAAGAGTATCAAGCAAAACTGAGAGCCTATCTTGGCGAGCAGAAGGCAAACCAGGTGATCAGCGAGGCACTATACTTGATGAGCTTAGGAACCAACGACTTCCTCGAAAACTACTACGTTGTCCCGTTAAGGAGAGCCCAATTCAGTGTGACGCAGTACCAGGATTTTCTGGTGGGCATCTCTGAGAACTTCATCAGAGAACTGTACAACCTCGGAGCTCGGAAGCTTTCTGTGACGGGACTTGTTCCCATGGGGTGTCTCCCACTGGAGAGGGCTCTGAACGTCATAGAGAACCATGATTGTAACAAAGAGTACAACGACGTCGCTTTGGGGTTCAACAAGAAGCTCGAGAACATGCTGGCCAAGCTCCAGAGAGAGCTTCCTTTGATGAAGTTGGTGTGTGCAGATGTATACGACCTCGTCGATGACATTATCAAAAGACCTTCCTCCTACGGATATGAAGTAGTAGAGAAGGCATGTTGTTCCACAGGAACATTCGAGATGAGCTACCTCTGCAGTGAGCTGAATCCACTGACGTGCAGTGACGCCAGCAAATATGTCTTCTGGGATGCCTTCCATCCCACGGAGAAAACTAATCGCATTGCCTCAGAATATTTAATTCCAAAGCTTCGGGCAGCTTTTCAATGA 1050 0.4848 MEIIYMALLWLFLATHILVVLGINIPAVIVFGDSSVDTGNNNVIATVLKSNFRPYGRDFEGGRATGRFSNGRVPPDLISEAFGLKRTVPAYLDSSYSIKDFATGVNFASAGTGYDNKTASVLNVIPLWKELEYYKEYQAKLRAYLGEQKANQVISEALYLMSLGTNDFLENYYVVPLRRAQFSVTQYQDFLVGISENFIRELYNLGARKLSVTGLVPMGCLPLERALNVIENHDCNKEYNDVALGFNKKLENMLAKLQRELPLMKLVCADVYDLVDDIIKRPSSYGYEVVEKACCSTGTFEMSYLCSELNPLTCSDASKYVFWDAFHPTEKTNRIASEYLIPKLRAAFQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0610 349 CDD SGNH_plant_lipase_like 26 343 IPR035669 -
Dere05g0610 349 Pfam GDSL-like Lipase/Acylhydrolase 28 340 IPR001087 GO:0016788
Dere05g0610 349 SUPERFAMILY SGNH hydrolase 27 346 - -
Dere05g0610 349 PANTHER GDSL ESTERASE/LIPASE EXL3 15 340 - -
Dere05g0610 349 Gene3D SGNH hydrolase 23 347 IPR036514 -
Dere05g0610 349 FunFam GDSL esterase/lipase APG 21 344 - -
Dere05g0610 349 Coils Coil 247 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0610 Dere-ChrDere05 9985941 9990204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0610 6 345 Pollen Coat Proteome AT1G75910 35.652 2.54e-67 213