Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0602 ATGCATTCAAGGTTCGATCTCTACGGAAACTATTTCCACTTTTTCTTCTTTTTCCACGCGCCGCAATACTATGATCCAACGAAAACTCCAAAGATACTGAGAAATATGAAAGTGGAGGAACTCCAACTCCAACTCGAACTCCGTCAGCAGCAGCAGCGGCAGAGCAAGGAGAAGATCCAACTGGCTGTCGCTGAACTCTCGCCGCCCGTCGCTGCCTCCGTCGATGATGTTGGTGCTTGTGAGAAGGTCTTCGATGGCGAAGGTGAGGATATCTTCATCCAGCCTCTCAATTTCGCGATGGTAGATAACGGCATTTTTCGGTCCGGCTTCCCTGAGCCCGCCAACTTCTCCTTCCTCCAAACCCTCAGTCTTCGCTCCATCGTATATCTGTGTCCCGAGCCGTACCCGGAAGCCAACTTGGAGTTCTTGAAGTCAAATGGGATCAAGCTTTATCAATTTGGGATAGAGGGTCACAAGGAGCCTTTTGTAAGCATCCCAGAGGACACAATCTCTCAAGCACTAAGAGTTCTCCTCGATGTCAGGAACCACCCAGTTTTAATTCACTGTAAACGGGGCAAGCACCGAACAGGTTGTCTTGTAGGCTGCTTCAGAAAATTGCAAAAATGGTGCTTGTCATCTGTGTTCGATGAGTACCAACGTTTTGCAGCTGCTAAGGCAAGAGTTTCAGATCAGAGATTTATGGAATTGTTTGATATTTCCAGCTTGGCACATTTGCCCATGTCATTTTCATTTTCTCAGAGGAAGAACCTAGAAGCGTGA 780 0.4756 MHSRFDLYGNYFHFFFFFHAPQYYDPTKTPKILRNMKVEELQLQLELRQQQQRQSKEKIQLAVAELSPPVAASVDDVGACEKVFDGEGEDIFIQPLNFAMVDNGIFRSGFPEPANFSFLQTLSLRSIVYLCPEPYPEANLEFLKSNGIKLYQFGIEGHKEPFVSIPEDTISQALRVLLDVRNHPVLIHCKRGKHRTGCLVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFMELFDISSLAHLPMSFSFSQRKNLEA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0602 259 Coils Coil 33 58 - -
Dere05g0602 259 CDD PFA-DSP_Siw14 92 238 - -
Dere05g0602 259 PANTHER TYROSINE-PROTEIN PHOSPHATASE 60 246 - -
Dere05g0602 259 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 239 IPR029021 -
Dere05g0602 259 Gene3D Protein tyrosine phosphatase superfamily 92 241 IPR029021 -
Dere05g0602 259 FunFam probable tyrosine-protein phosphatase At1g05000 91 241 - -
Dere05g0602 259 PRINTS Plant and fungal dual specificity phosphatase signature 148 162 IPR020428 GO:0016791
Dere05g0602 259 PRINTS Plant and fungal dual specificity phosphatase signature 165 179 IPR020428 GO:0016791
Dere05g0602 259 PRINTS Plant and fungal dual specificity phosphatase signature 129 142 IPR020428 GO:0016791
Dere05g0602 259 PRINTS Plant and fungal dual specificity phosphatase signature 92 109 IPR020428 GO:0016791
Dere05g0602 259 Pfam Tyrosine phosphatase family 93 243 IPR004861 -
Dere05g0602 259 ProSitePatterns Tyrosine specific protein phosphatases active site. 187 197 IPR016130 GO:0016311|GO:0016791
Dere05g0602 259 ProSiteProfiles Dual specificity protein phosphatase domain profile. 97 251 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0602 Dere-ChrDere05 9833807 9839272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0602 88 254 Protein tyrosine phosphatase (PTP) family AT4G03960 75.449 4.97e-96 278