Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0581 ATGGGAACTGAAGTGACACAAGGTGTGTATTTGCCCCATAACTATAAGACAGAAGGAAATGATGCATATTGGGATCCAAATGCCTTTTCCAAAATGTGTAAACTTCGATTACTCATCATAGATTGTAGTTTGAACCTTCCCTATGGTCTTAAATGTCTCCCAAGTGCATTGAAAGTTCTTCATTGGGATACGTATCCTTTGAAAGCTCTTCCGCTTGCAACTCAATTCAATGAACTTGTTCACCTCAAAATGAATCATAGCAAAATAAAGCAACTTTGGAATGGCAAGCAACGTTTGGAAAAGTTGAAGGTTATGGATTTGAGTTATTCTAAACACTTAATTGAAACTCCAGATTTTTTTGGCATTCCAAATCTTGAAAGATTGATTCTTGAAGGATGCATAGCCCTTGCTAAGATTCATCCATCATTTGGAGAGCTCAAAAGGCTTGCTGACGTAAATTTGGAAGGCTGCAGAAATCTTAAAGCCCTTCCAAGAAAATTGGAAATGACTTCACTAAAGAATTTTAATCTTATGGAGACAGGTATAAAAGAAGTTCCTGCATCACTTGGATTATTAACTAGCATTGAAGTTCTGAACTTAAGAGGTTGCCAAAAAGTTGAAGTCCTTCCAGAAAAATTGGAAATGAATTCTTTGAAAGAATTTGTTCTCATGGGGTGCACTCAAGTTAAAAATCTTCCAGAGTTTGGGGAAAACATGGAAAATCTAGTAACGCTTGATGTCAGGGATACAGGTATAGCCAAACTTCCTGTATCACTTGAATTATTGAGTGGTCTTGAAGAACTGGAATTAGGAGGCTGCTCAAAAGTTTTTAAACTGCCAGAAAATTTGAATGAAAATAAAGCCTTGGAAGTGCTTGATGTAAGCGGAACTGCTATAACAGAATTACCTTCTTCCATTGGTCATTTAGAAGAACTCAGGAGACTGTCATTTCCTAAGGGCATAATACTGCCTCCTTCTATCTTCAATCTTAAATCCCTAGAGGAATTAGATTTAAGCTACTGCAATATTGGTGATGGCTTCATTCCTGATGATCTTGGTGGCTTATTATCATTGACGGTGTTAGATCTAAGTGCAAATAAGTTTGTAAATCTACCACCTGGCTGCTGTTCTAATCTTTTGAAACTAGAAAGACTTTATTTAAGTTTCTGCCCACGGCTTCAGTCGTTGCCGCAGCCGCCAAATGTTTTTCAAGGAATCATAGAAGCGAAAGAATGTGCGTCAATGAGAGCATTGTCAGACAAACAGTTATCACATCTCTTCGCTTCAGTTGACCAGTGTGGCAGTGAAGACTTTGGGAGGTCGACATTTATACCATATTCCAGGGACAAATTATTCAGATGCTGTGAAGTGATTATTAAAGGGAGTGAAATACCATCATGGTTTGAGAATCAAAGTTCTGTTTCCCTGAATGAGGATTCTGAAGGTTCAATAATAATAGACGTCCCTCCTTCAAGTGAATTGTTAGGATTTGTGTTCTGCATTCTGCTAGATGATTTGTATTATTCCACCGAGGCCAAAAAGCCAAAATATCGTCATCCTGCCTTCCGATTCTCATTTACTAATGCTTCCAATGGTGATTTGGAGAGCAGTATCTGGAGACATTATGTCGGTAAGAGATCAAGATTAGGAATAAAGTCTCCCCACCTTTGGACGGTGTTTGGGCAAATAAAATCAAATTCTACATACAACCAGCTTCACTTGGGTATTGCGCCTATTGAGGATGATTGGATGCCAAAAAAATTGGATGAAAGAGTTTCAATAAAGTGCGGATGGCGTGTCATTCACGAAGATGAATATGAGAAGTGGGCCAAAACAATGAGAGAAATGTTGGAAGAGCTCAAGCATGGAGAAAATGGAATGTGCTCTGAAGCTAAAGAACAAGGACAGTGCATTCGTTGTAGACGGACAAGAGAGATGTTGCGGATGCATGTCTTGGTTTCGTGA 1965 0.3868 MGTEVTQGVYLPHNYKTEGNDAYWDPNAFSKMCKLRLLIIDCSLNLPYGLKCLPSALKVLHWDTYPLKALPLATQFNELVHLKMNHSKIKQLWNGKQRLEKLKVMDLSYSKHLIETPDFFGIPNLERLILEGCIALAKIHPSFGELKRLADVNLEGCRNLKALPRKLEMTSLKNFNLMETGIKEVPASLGLLTSIEVLNLRGCQKVEVLPEKLEMNSLKEFVLMGCTQVKNLPEFGENMENLVTLDVRDTGIAKLPVSLELLSGLEELELGGCSKVFKLPENLNENKALEVLDVSGTAITELPSSIGHLEELRRLSFPKGIILPPSIFNLKSLEELDLSYCNIGDGFIPDDLGGLLSLTVLDLSANKFVNLPPGCCSNLLKLERLYLSFCPRLQSLPQPPNVFQGIIEAKECASMRALSDKQLSHLFASVDQCGSEDFGRSTFIPYSRDKLFRCCEVIIKGSEIPSWFENQSSVSLNEDSEGSIIIDVPPSSELLGFVFCILLDDLYYSTEAKKPKYRHPAFRFSFTNASNGDLESSIWRHYVGKRSRLGIKSPHLWTVFGQIKSNSTYNQLHLGIAPIEDDWMPKKLDERVSIKCGWRVIHEDEYEKWAKTMREMLEELKHGENGMCSEAKEQGQCIRCRRTREMLRMHVLVS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0581 654 SMART LRR_typ_2 287 309 IPR003591 -
Dere05g0581 654 SMART LRR_typ_2 379 405 IPR003591 -
Dere05g0581 654 SMART LRR_typ_2 355 378 IPR003591 -
Dere05g0581 654 SMART LRR_typ_2 239 262 IPR003591 -
Dere05g0581 654 SMART LRR_typ_2 330 354 IPR003591 -
Dere05g0581 654 SUPERFAMILY L domain-like 23 317 - -
Dere05g0581 654 SUPERFAMILY L domain-like 323 403 - -
Dere05g0581 654 Gene3D Ribonuclease Inhibitor 321 432 IPR032675 -
Dere05g0581 654 Gene3D Ribonuclease Inhibitor 170 320 IPR032675 -
Dere05g0581 654 Gene3D Ribonuclease Inhibitor 18 169 IPR032675 -
Dere05g0581 654 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 215 315 - -
Dere05g0581 654 Pfam Leucine Rich Repeat 332 355 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0581 Dere-ChrDere05 9323512 9326582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0581 2 329 WRKY Transcription Factor Family AT4G12020 36.522 3.97e-42 162