Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0577 ATGGCCACAAATTTCTGGGTTTCTCTGATTTTCATTTTGGTCTTGAATTTCCATATCCCATCCTCACATGCCCAGCAAGCGTACGTCAACAACAAGCAGCTCGACTGCGAAAACTCGTACAATGTCACATACGGCAATCTATGCAACGGCGTCGCTCGCTCCTGCACCTCCTACCTCACCTTCCGATCATCTCCTCCTCAGTATAGTTCTCCTTCCTCCATAGCTTTTCTCTTGAACTCCACGACCCGCCTCATTGCCGACACCAACAACATCTCCGACGTTGACCCCATCTCTTCCAGCTCTATGGTCATCGTCCCCGTGAGCTGCTCCTGCTCCGGCAACGGTGAATACTACCAGCACAACGCCTCCCACTTCTTGAAGCGAAATGAAACCTATTTCAGTGTGGCTAATAATACCTACCAGGCTCTCACTACTTGCCAAGCTCTTCAAGCTCAAAACGTTTACGGAGTCCGGAATCTCACAGCTGGGCTTGAGTTGCATGTGCCTCTTCGGTGTGCGTGTCCCACAGCCAAGCAGGTGGAGTCTGGGTTTAAGTATTTGCTCACGTATTTGGTTTCGCAAGGTGAATCGTCGTCTTCCATTGCTGAGATATTTGGGGTCGATGAACAGAGCATTTTGGATGCGAACGAGCTTTCTGCGAATTCCGTTATCTACTATTTTACTCCGATCATGGTTCCTCTTAAAAAAGAGCCCACCGGAATAAAGACGGTGGTTCCTCCCCCTCCCCCTCCGCCGCCGCCGCCTCCGCCGGCGTCGGCAGGCGATTCCAATTCTTCCAAGAAATGGGTCATCGTCGGAGTCACGGTCGGAGCTGCTTTCCTCCTTCTTCTCGCCCTGTCGGGATTTCTCCTCTGCTATTTCCGCCGCCGCCCCCGGGGGCAATCTCAGCCACCGTCATCGGCTCCGACAACGACGACCGACACCACTAAGAAGCTCGCAGATTCTGGCACGACCGGCTCATGGTCCCTATCTTCGGAGGGGATTCGCTACGCCATTGATTCGTTAACAATTTATGAATTCGAGGATTTGCGGAAAGCCACGAACTTTTTCAACGAAACTAACAGAATCAAGGGATCTATTTACAGAGCAACGTTCAAGGGAGACGATGCTGCGGTCAAAATCTATAAAGGGGATGTGTCCAGCGAGATCAACATTCTGAAGCGAATCAACCACACCAACATCACGAGGCTCTCTGGCTACTGCGTCCACAAAGGAAACACTTATCTCGTTTATGAATTCGCCCAAAATGGATCCCTTGACGTTTGGCTTCATAACAACAATAAGAACAAGTATCAGAATTCTTTCTCGACTCTGAATTGGAGGCAGAGGGTTCAGATTGCTCACGACGTTGCTGACGCACTGAATTACCTTCACAACTACACCAACCCTCCTCATATCCACAAGAATCTCAACAGTGGGAATGTGCTTCTGGATGGGAATTTCAGAGCTAAAGTTTCGAACTTCGGGTTAGCGAGAGTACTGGACAATGAAGAAGAAGGTGGGTTTCAAGTTACGAGGCATGTGATCGGCACACAAGGGTATATGCCACCGGAGTATATGGAGAACGGCGTGATAACTCCGAAAATGGACGTTTTTGCATTTGGGGTTGTGATTCTGGAGCTGATTTCAGGGAGGGAAGCCATTGTTGGGGTGGAGAAGCTTCTGTCATCGTTTGCGAGGGAGATGCTTGATGGAGACAATGTGGTGGAGAAGCTACGAGGTTTTGTGGATCCAAGTCTGGGAGAGGAATACCCACTGGATTTGGCATACTCCATGGCACAAATCGCTAAACGCTGCGTCGAACGCGACATCAATTCGCGACCAGACATTTCTGATGTGTTCATGACACTGTCCAAGATTCAATCCTCTACGCTTGATTGGGATCATTCTGTTGAGGTTGATAGTTCCAAATCTTTTACCACAATGTCCGGCGGCAGATAG 1962 0.4959 MATNFWVSLIFILVLNFHIPSSHAQQAYVNNKQLDCENSYNVTYGNLCNGVARSCTSYLTFRSSPPQYSSPSSIAFLLNSTTRLIADTNNISDVDPISSSSMVIVPVSCSCSGNGEYYQHNASHFLKRNETYFSVANNTYQALTTCQALQAQNVYGVRNLTAGLELHVPLRCACPTAKQVESGFKYLLTYLVSQGESSSSIAEIFGVDEQSILDANELSANSVIYYFTPIMVPLKKEPTGIKTVVPPPPPPPPPPPPASAGDSNSSKKWVIVGVTVGAAFLLLLALSGFLLCYFRRRPRGQSQPPSSAPTTTTDTTKKLADSGTTGSWSLSSEGIRYAIDSLTIYEFEDLRKATNFFNETNRIKGSIYRATFKGDDAAVKIYKGDVSSEINILKRINHTNITRLSGYCVHKGNTYLVYEFAQNGSLDVWLHNNNKNKYQNSFSTLNWRQRVQIAHDVADALNYLHNYTNPPHIHKNLNSGNVLLDGNFRAKVSNFGLARVLDNEEEGGFQVTRHVIGTQGYMPPEYMENGVITPKMDVFAFGVVILELISGREAIVGVEKLLSSFAREMLDGDNVVEKLRGFVDPSLGEEYPLDLAYSMAQIAKRCVERDINSRPDISDVFMTLSKIQSSTLDWDHSVEVDSSKSFTTMSGGR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0577 653 MobiDBLite consensus disorder prediction 300 327 - -
Dere05g0577 653 ProSiteProfiles Protein kinase domain profile. 314 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0577 653 Gene3D Transferase(Phosphotransferase) domain 1 421 647 - -
Dere05g0577 653 ProSiteProfiles LysM domain profile. 188 232 IPR018392 -
Dere05g0577 653 SUPERFAMILY LysM domain 188 233 IPR036779 -
Dere05g0577 653 MobiDBLite consensus disorder prediction 241 262 - -
Dere05g0577 653 MobiDBLite consensus disorder prediction 299 327 - -
Dere05g0577 653 Pfam Protein tyrosine and serine/threonine kinase 383 622 IPR001245 GO:0004672|GO:0006468
Dere05g0577 653 Gene3D Phosphorylase Kinase; domain 1 331 420 - -
Dere05g0577 653 Pfam LysM domain 190 226 IPR018392 -
Dere05g0577 653 SUPERFAMILY Formin homology 2 domain (FH2 domain) 247 257 - -
Dere05g0577 653 SMART LysM_2 189 233 IPR018392 -
Dere05g0577 653 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 8 636 - -
Dere05g0577 653 MobiDBLite consensus disorder prediction 242 260 - -
Dere05g0577 653 Gene3D LysM domain 176 242 IPR036779 -
Dere05g0577 653 FunFam PTI1-like tyrosine-protein kinase 3 421 638 - -
Dere05g0577 653 SUPERFAMILY Protein kinase-like (PK-like) 339 628 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0577 Dere-ChrDere05 9264733 9266694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0577 7 646 Receptor kinase-like Gene Family AT2G33580 51.786 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere05g0577 PK_Tyr_Ser-Thr 2.2e-35 CL0016