Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0572 ATGAATGCTACTCATCAGGGAACTGAAGTGACGCAAGGTTTGCTTTTGCCATATAACTTTGAGACAAAAGGAGATGATGCATATTGGGATCCAGATGCCTTTTCCAAAATGTGTAATCTTCAATTACTCATCGTAAGACGTAGTTTGAACCTTCCTTATGGTCTCAAATGCCTCCCTAGCGCATTGAAAGTTCTTCATTGGGATGGATATCCTCTGAGAGCTCTTCCGCTTGGTACCCAATTGGATGAACTTGTTTACCTCAAAATGCAAGGTAGCAAAATAAAGCAACTTTGGAAAGGCACACAAGTCAAAAATCTTCCGGAGTTTGGGGAAAATATGAAAAACATAGTAACACTTGATGTTGCGGAGACAGGAGGTTGCAAAAATCTTGAAGTCCTTCCAGAAAAATTGGAAATGAATTCTCTGAAGGATTTTGTTCTTAGTGGGTGCACTAAAGTTAAAAGTCTTCCAGCGTTTGGGGAGAATATGAAAAATCTAGTAACACTTAATGTCATGGAGACAGGAACTGCTATAAAAGAATTACCTGATTCCATTGGTCATTTAGAAAAACTCCGGACACTGTCATTTCCTAAGGGCATAATATTGCCTGCTTCTATTTTCAATCTTAAATCACTGGAGGAATTAGATTTAAGCTACTGCAATATTGGTGACGGGTTCATTCCCGATGATCTCAGTGGCTTATCATCATTGAGGACCTTAGATCTAAGTGGAAATATGTTTGTGAATCTACCTGCTGGCTGCTGCTCTAATCTTTTGCAACTACAAACCCTGCGTTTGAATTTCTGCCCAAGGCTTCAGTCATTGCCATTGCCTCCGCCAGGTAATTTTGAAAGAATAGATGCACAAGAATGTGCTTCAATCAGACCTTTGTCAAACGAACAGTTCTTACAACTCTTTGCTTCAACTGTCCAGTGCGGCCGCGATCAAAGCTTTTCAGTGCCAAAAACAATTTATGCATGGTCAACTACAAGATTTTCAGTGACTATTAAAGGGAGTGAAATACCATCATGGTTTGAGAACCAAAATTCTCTTTCCCTGAATGAGAGATACGAAGGTACGATAATAATAGACGTCCCTACTCCACATGAATGGTTAGGATTTGTGTTCTGCATTTTGCTAGATGATGACAGTTTGTCACTGACTGAGAGTACCCAAGCCACAACAAATGAATGTGAAATCGTGCCTTCAGAAGCATCATCTCCATGCTTGGAAAAGGAAGATGATTCACGGATGCAATTCAGTGTAGACAAACCAAAGTACGAGATATGTAAAGAGAAGCTCTGGATGCAAGTCTTGGTTTCGTTAAAAACTTTGATTACCTTCCTGCTTCGGACGACAAAATCAGAAGCACCAGCTCTTGAAGAGGAGGTAGTCCTCAAGAAGGGTCTACGGATTGTGGCGGAAGATGCAGTGCTTATAGACTTTGTGCCAAAGCATGGTGAAGGGAATTGA 1473 0.406 MNATHQGTEVTQGLLLPYNFETKGDDAYWDPDAFSKMCNLQLLIVRRSLNLPYGLKCLPSALKVLHWDGYPLRALPLGTQLDELVYLKMQGSKIKQLWKGTQVKNLPEFGENMKNIVTLDVAETGGCKNLEVLPEKLEMNSLKDFVLSGCTKVKSLPAFGENMKNLVTLNVMETGTAIKELPDSIGHLEKLRTLSFPKGIILPASIFNLKSLEELDLSYCNIGDGFIPDDLSGLSSLRTLDLSGNMFVNLPAGCCSNLLQLQTLRLNFCPRLQSLPLPPPGNFERIDAQECASIRPLSNEQFLQLFASTVQCGRDQSFSVPKTIYAWSTTRFSVTIKGSEIPSWFENQNSLSLNERYEGTIIIDVPTPHEWLGFVFCILLDDDSLSLTESTQATTNECEIVPSEASSPCLEKEDDSRMQFSVDKPKYEICKEKLWMQVLVSLKTLITFLLRTTKSEAPALEEEVVLKKGLRIVAEDAVLIDFVPKHGEGN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0572 490 SUPERFAMILY L domain-like 29 291 - -
Dere05g0572 490 Pfam Leucine Rich Repeat 84 102 IPR011713 -
Dere05g0572 490 Gene3D Ribonuclease Inhibitor 29 172 IPR032675 -
Dere05g0572 490 PANTHER LEUCINE-RICH REPEAT-CONTAINING 47 222 - -
Dere05g0572 490 SMART LRR_typ_2 209 233 IPR003591 -
Dere05g0572 490 SMART LRR_typ_2 234 257 IPR003591 -
Dere05g0572 490 Pfam Leucine Rich Repeat 236 258 IPR001611 GO:0005515
Dere05g0572 490 Pfam Leucine Rich Repeat 211 234 IPR001611 GO:0005515
Dere05g0572 490 Gene3D Ribonuclease Inhibitor 174 357 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0572 Dere-ChrDere05 9175673 9180162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0572 30 252 WRKY Transcription Factor Family AT4G12020 31.159 2.47e-24 105