Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0571 ATGTTCCCAATTCCATGTCAAGAGTCAAGCCACTGTTTCTTTAGCGACTTCGGTCAACGCATTGACCTGAGGCATGAAGCAGAACTTATCGAAAATGTGATAAAAGTATTATGGTGCAATTTACGTTTTAAACTACCATCTTACGATGATATGCTAGTTGGAATTGACATAAGGATGGATTCAATGAGTTCACTACTGGGGATAGGGTTCGATGAGGTCCGTTTTGTAGGGATATGGGGCATGGGTGGTGTTGGCAAGACAACTCTAGCTAATCTTGTCTATAAGAGATTCTTAGATGAATTTGAAATTTGTTGCTTTCTTGGCAATGTGAGGGAGGTTTCTGAAGGACATGATGGCTTGATTCACTTACAAGAAAAATTCCTTTCACATTTCAAGCTAAAGGACATGGGAACTGAAGTTATACAAGGTTTAGTTTTGCCCAACAACTTTTTGTTATACAATGCATATTGCGATCCTAAAGCCTTTTCAAAGATGACTAATCTTAGATTACTCATCATATGCTGGAATTTGAACCTTCCGTATGGTCTCAAATGCCTTCCTAATGCATTAAAATTTCTACTATGGCACTGGTATCCTTTAGAAGCTCTTCCGCTTGGAACCCAATTGGATGAACTTGTTTATCTTGAAATGCACAATAGCAAAATAAAGCAACTTTGGAATGGTATTGGGGAATTTGTTCTTTGTGGGTGCACTAAAGTCAGAAAGCTTCCAGAATTTGGGGAAAACATGAAAAATCTGGTGATACTTGATTTAGAGGAAACTAGCATCGTAAAACTACCTGCCTCACTTGGATTCTTGACTGGCCTTGAAGATTTGAATTTAAAAAGATGCAAAAATCTTGTTTGCCTTCCACATACCATTAACAATTTGAAGCATCTTAAAATTCTTGATATCTCTTGCTGCTTAAAATTTTCTAAACTACCAGATAACTTGAATGAAAATGAGGCCTTGGAAAAGCTTGGTGTAAATGGAACTGCTATAATAGAACTACCTTCTTCCATTGGTCATTTACAAAATCTCAAGACACTGTCATTGTTTCCGAGGCATTCATTTCCTAGGCGCTTATTGTTGCCCACTTCTATCTTCAATCTTAAATCACTGACAGAATTAGATTTAAGCTATTGCAGTATAGATGACGGATTCATTCCTAATGATCTCAGTAGCTTATCATCGTTGCAGCACTTAGATCTAAGTGGAAACAAGTTTGTGAATTTACCAATTGGCTGCGTTGCTAATCTTTTGAAACTAAGCAGATTTTATTTGAATTTCTGCACAAGGCTTCAGTCACTACCACAGCTTTCACCAGGTTTAATAGTAATGAAGGCAGAAGGTTGTACTTCAATAGAAGCTTTGTCTGATGAACAAGTAGCACATCTCTTTGCTTTAGTTGACAAGCGTGGCCAATATGCTCGAGGATTATCCTACATAAGTCCAGATGCTAACATAAGGGCATCATTGGCAATGGACACCTTCTCAGCCACTATTCCTGGGAGTGAAATACCATCATGGTTCCATAACCAAAATTATCTTTCCCTGAATCAGAAAGGCAAAGCTTCAATAATAATAGACATGCCTCCATGTGAATGGCAAGAATTTGCATTATGCATTGTGCTAGATGATATGTTTTATTACACTGAATGGAATCTGCCTTTCTGGGATTATCATATATCTAGAGCTTCTGATAAAGCATTTGCAACCATTGGAGGCAATGCAGTCCATCTTGAAAAAGGAATAAATTATCCTCACCTTTGGATCTTGGTTTCGCATATTAGAGAGAAAAATGGTTTGGAATTATCAATGAAATACAAGCAGCTTTGTCTGGAATTTACGGCTGGTTATGAATTTGGTGTTTGGGGGCCACAAAAGAAAGTAGATGGAATAATTTCAGTGAAGTGTGGATGGCGTGTCATGTCTAGAGTAGATTTTGAAAGTCACCTGCCCATATTGGAAGAGCACAAGGAAGGATGCAGTTTGCCCCCAATTGAGAGCTCCCAAATCATAATTAATGAATGTGAAACCATGTCTTCAGAGGCATCTTCTTCAAGCTCTGAAGAGGAAGGCAAATCGGATGATTCTTGGATGCAGTTCATTCCAGATGATGCAAGGTACGATATGGAATGTGATCTTATCTTCCCTTAA 2160 0.381 MFPIPCQESSHCFFSDFGQRIDLRHEAELIENVIKVLWCNLRFKLPSYDDMLVGIDIRMDSMSSLLGIGFDEVRFVGIWGMGGVGKTTLANLVYKRFLDEFEICCFLGNVREVSEGHDGLIHLQEKFLSHFKLKDMGTEVIQGLVLPNNFLLYNAYCDPKAFSKMTNLRLLIICWNLNLPYGLKCLPNALKFLLWHWYPLEALPLGTQLDELVYLEMHNSKIKQLWNGIGEFVLCGCTKVRKLPEFGENMKNLVILDLEETSIVKLPASLGFLTGLEDLNLKRCKNLVCLPHTINNLKHLKILDISCCLKFSKLPDNLNENEALEKLGVNGTAIIELPSSIGHLQNLKTLSLFPRHSFPRRLLLPTSIFNLKSLTELDLSYCSIDDGFIPNDLSSLSSLQHLDLSGNKFVNLPIGCVANLLKLSRFYLNFCTRLQSLPQLSPGLIVMKAEGCTSIEALSDEQVAHLFALVDKRGQYARGLSYISPDANIRASLAMDTFSATIPGSEIPSWFHNQNYLSLNQKGKASIIIDMPPCEWQEFALCIVLDDMFYYTEWNLPFWDYHISRASDKAFATIGGNAVHLEKGINYPHLWILVSHIREKNGLELSMKYKQLCLEFTAGYEFGVWGPQKKVDGIISVKCGWRVMSRVDFESHLPILEEHKEGCSLPPIESSQIIINECETMSSEASSSSSEEEGKSDDSWMQFIPDDARYDMECDLIFP 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0571 719 SMART LRR_typ_2 371 395 IPR003591 -
Dere05g0571 719 SMART LRR_typ_2 396 419 IPR003591 -
Dere05g0571 719 SMART LRR_typ_2 209 232 IPR003591 -
Dere05g0571 719 SMART LRR_typ_2 250 273 IPR003591 -
Dere05g0571 719 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 139 352 IPR044974 GO:0006952
Dere05g0571 719 Gene3D Ribonuclease Inhibitor 159 469 IPR032675 -
Dere05g0571 719 SUPERFAMILY L domain-like 153 461 - -
Dere05g0571 719 Gene3D - 40 156 IPR027417 -
Dere05g0571 719 PRINTS Disease resistance protein signature 394 410 - -
Dere05g0571 719 PRINTS Disease resistance protein signature 75 90 - -
Dere05g0571 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 135 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0571 Dere-ChrDere05 9161593 9166719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0571 127 413 WRKY Transcription Factor Family AT4G12020 33.010 8.65e-25 108