Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0568 ATGGCACTGAGTGTCCCAGAAGCATCTTCTTCAAACTCTTCCAAGCATGAGTCAGAACTGATTGAAAAGTTGGTTGAAGTGTTATGGACCAAATTACGTAGCAGATTGCCAACTTACCGTGATACACTAATTGGACTTGATCGGAGACTAGATGAAATGAAATCACACTTAGGGATAGGGTTGGATGATGTTCGGTTCGTAGGAATTTGGGGTATGGGCGGTATTGGTAAGACAACTCTTGCAAGAGGAACAAAAGTAATACAAGGTATCATTTTGCACACAGAAAAGTCATATGAGGCACACTGGGATCCTGAAGCATTTTCAAATATGCGTAAACTTAGATTACTCATTATATCAAGTACTTTGTACCTTCCCCGTGGCCTCAAATGCCTTTCGAGTACCTTGAAAGTACTTCAGTGGAGGGATTATCCTCTAGAAAATCTCCCTCCTGGAACCAAGCTAGATAAACTTGTTGATCTTACAATGCAATATAGCAAAATAAAACGACTTTGGAAGAAAAGCCAGCCTTCACCTGGTTTAGGACTAGTGAAAGCTGAAGGCTGTCCCTCAATGGAAACTTTGTCAGATAAACAACTAGTGCATCTCTTTGCTTTAGTTGACAAGCGTGGTCAATCTGCTCGAGGGTTATGCTATATGGGTTTGGATGCTGACTTAGTGGCATCATTGTTAATGGAAACCTTATCAGCCACTGTTCCCGGGAGTAAAATACCATCATGGTTCGATAACCGAAGCTGTCTTTCCCTGAATGAGCAAGGCAAAGCTTCAATAATAATAGACATGCCTCCATGTGAATGGTTAGGATTTGTTGTATGCATTGTGCTAGATGACATGTTTTATTCCCCTGAAGCCTACCCAAAAAAGTTGGCTTCACCACTATGGAATTATTACATATCCAGAGCTTCTGATTGTGCGTTTAAATTGATTGGAGGTAATGTAAAATATGTAGAGAAAGGAATAAATTATCCTCACCTTTGGATTTTGGTTGGGCAAATTAGAGAGAAAAATGGTTTGGAATTATCAATGAAATACAGGCAACTTCGCCTGGAATTTACAGCTGATTATGGTTTTCATCAATGGGCTCAACACAAAAAAATGGATGGAATAGTTTCAGTGACGTGTGGATGGCGTGTCATGTCCAAAGTTGATTTTGAAAGTCACCTTCCAATATTAGAAGAGCACATGGAAGGAGAAAATGGAATGTGCTCCAAAACTGAAGAGCTAGGGCAGTGCAGTTTGTCACTAACTGAGAGCTCCCATCCCATAATCAAAGAATGTGAGACCATGTCTACAGATTCATCATCTTCATGCTCTGAAGAGGAAGACAAATTGGATGATTCCTGGATGCAGTTCATTCCAGATGATGCAAGGTACTTATGGGATATGAAATGTGATCTTATCATTTCTTAA 1428 0.4006 MALSVPEASSSNSSKHESELIEKLVEVLWTKLRSRLPTYRDTLIGLDRRLDEMKSHLGIGLDDVRFVGIWGMGGIGKTTLARGTKVIQGIILHTEKSYEAHWDPEAFSNMRKLRLLIISSTLYLPRGLKCLSSTLKVLQWRDYPLENLPPGTKLDKLVDLTMQYSKIKRLWKKSQPSPGLGLVKAEGCPSMETLSDKQLVHLFALVDKRGQSARGLCYMGLDADLVASLLMETLSATVPGSKIPSWFDNRSCLSLNEQGKASIIIDMPPCEWLGFVVCIVLDDMFYSPEAYPKKLASPLWNYYISRASDCAFKLIGGNVKYVEKGINYPHLWILVGQIREKNGLELSMKYRQLRLEFTADYGFHQWAQHKKMDGIVSVTCGWRVMSKVDFESHLPILEEHMEGENGMCSKTEELGQCSLSLTESSHPIIKECETMSTDSSSSCSEEEDKLDDSWMQFIPDDARYLWDMKCDLIIS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0568 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 82 IPR027417 -
Dere05g0568 475 Gene3D - 26 86 IPR027417 -
Dere05g0568 475 Gene3D Ribonuclease Inhibitor 87 205 IPR032675 -
Dere05g0568 475 Pfam Leucine Rich Repeat 156 172 IPR011713 -
Dere05g0568 475 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 82 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0568 Dere-ChrDere05 9083282 9088264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0568 13 81 WRKY Transcription Factor Family AT4G12020 42.029 2.35e-06 48.5