Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0549 ATGGAAGCAAACAAAGAGGAAGCGCTTAAAGCAATAGAGATTGCTGAGAAGCGATTTGCTCAAAGAGACTTTGCAGGCGCAAAAAGTTATGCATTAAAGGCAAAATCAGTTTGTCCAGGATTGGAGGGAATACCTCAAATGGTGGCCACTTTTCAAGTTTACGTTGCCTCTGAAATCAAACATAATGGCGAACTAGATTATTATTCAATTCTTGGAATAAAACCTTCAGCAGATAAAGAGACCGTCAAAAAACACTATAAGAAGTTGGCAGTGTTGCTTCACCCGGATAAGAACAAATGCGTGGGAGCTGATGGGGCATTTAAGCTTGTATCTGAAGCATGGACTTGGCTGTCAGATAGTGCTATGCGAAGTTCTTATGATCTCAAGAGAAATGCACAATTGGCTGCTGGGGTTAATCAGACGAATTTGTCATCAGTCCATGCTGCTGGTACTACAGGTTATAACAAATGTTTCAATTTGTCAACTTCTCATGGCAGGCTTGACACTTTCTGGACCATTTGCACCTCTTGTAAAGTTCAGTATGAGTATCTGCGCAAGTATGTGAACAAGAGACTTTCATGTAAGAACTGCCGTGGAACTTTCATTGCTGTTGAAACTGGGGCAGCCCCAGCAACTGGTTCATTCCCATATTGTCCTTGGTCATATGTGCCAGGCAATGGGTATGGAGGCCATTCATTTGATAACGTAACTTATGTTCCTACTACTACTACTACTACCTATTTCAATGGCAATGGGGTCACTGGATACCATTCTTCACATGGATATGAGTATGTTTCAAATGTTTCATTTCAGTGGAGCTCTGCTGGACATGTTGGTCAAAATGGTTCAACTACCCCACCTGCTGATTCTGTTTATAAAGCCAACGGAACCGGGAAGAGAGGAAGACCAAGACTCAAATCAGGAGTTGATCAGAGGCATCACGTGGCAGAGACTGCCTTCAATGTAAATCCAGATGCATCATTCTTCTGTAATGAACCTCAGGAAAATAAGCCTACTAAACCTGATAAACGAAGGAAAGTTGTTGTGGGAGCCAGTTTTCGAAATGGCTTTGAAGAAAAGGAGTTGAAGTATGCTCCTGAATCAAGATTGTCTGATGGGAATGAAAGCATTGGACATGGCCAGAAACTTCCCTGCGCAAGTGAAGTTCAAACTAAACAGTGTTCCATGGCACCGGCATTTGATGCTAGAAAATTACTGATTGAGAAGGCCAAGACAGATATTAAGAAGAAACTGGAAGAGATGAAGTTGGCATCTGAAGCTGCTGCTGCTATTGAGGAGAAAGCAAAAGCAAAAGCAGAAATTGGTCAAGTCAGTAAAGAGGAATATACAAGAGTGGGTTTAAATGCTTCTTACCATCAATTAGAGAATAGGAAAACTGCTCCTCTCTCAATAACTGTCCCAGATTCTGACTTTCATGACTTCGATAATGATAGGTCAGAGAAATGCTTCAAGCCAAAGCAAATATGGGCTTTGTATGATGAGGAGGATGGTATGCCTCGTTTATATTGTCTGATCCGTGAAGTCATCTCTGTCAATCCATTTAAGATTCTTATTAGTTATTTGAACTCAAAAACTGATAGTGAGTTTGGCCCTGTGAACTGGCTAGATTCTGGTTTTACCAAATCTTGTGGAAATTTCAGGGCCTGGAACTCTGATGTTGTTGACCAAGTTAATATTTTTTCTCATGTTCTAACCCGGGAGAAGGCTGGTCGAGGTGGATGTGTTCGCATATATCCCAGATGTGGAGATATTTGGGCTGTTTATCGACATTGGTCACCGGATTGGAACAGATCAACCCCAGATGAAGTGAGGCATCGGTATGAAATGGTGGAGGTTCTTGATGATTACTCTGAGGAGCTTGGTGTCTGTGTTAGTCCCCTTATAAAGTTGGCTGGATTTAAAACAGTATATCAGAGGAATACAGACAAAAAAGCCATTAGATGGATACCAAGAAGGGAAATGTTACGCTTTTCACACCAAGTGCCTTCTTGGCTGCTGAAGGGAGAGACGAGCAATCTGCCAGAAAGGTGTTGGGACCTTGACCCAGCTGCAACTCCGGATGAACTTCTTAATGCTGCTGCAAATGATCAATGA 2115 0.4203 MEANKEEALKAIEIAEKRFAQRDFAGAKSYALKAKSVCPGLEGIPQMVATFQVYVASEIKHNGELDYYSILGIKPSADKETVKKHYKKLAVLLHPDKNKCVGADGAFKLVSEAWTWLSDSAMRSSYDLKRNAQLAAGVNQTNLSSVHAAGTTGYNKCFNLSTSHGRLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFIAVETGAAPATGSFPYCPWSYVPGNGYGGHSFDNVTYVPTTTTTTYFNGNGVTGYHSSHGYEYVSNVSFQWSSAGHVGQNGSTTPPADSVYKANGTGKRGRPRLKSGVDQRHHVAETAFNVNPDASFFCNEPQENKPTKPDKRRKVVVGASFRNGFEEKELKYAPESRLSDGNESIGHGQKLPCASEVQTKQCSMAPAFDARKLLIEKAKTDIKKKLEEMKLASEAAAAIEEKAKAKAEIGQVSKEEYTRVGLNASYHQLENRKTAPLSITVPDSDFHDFDNDRSEKCFKPKQIWALYDEEDGMPRLYCLIREVISVNPFKILISYLNSKTDSEFGPVNWLDSGFTKSCGNFRAWNSDVVDQVNIFSHVLTREKAGRGGCVRIYPRCGDIWAVYRHWSPDWNRSTPDEVRHRYEMVEVLDDYSEELGVCVSPLIKLAGFKTVYQRNTDKKAIRWIPRREMLRFSHQVPSWLLKGETSNLPERCWDLDPAATPDELLNAAANDQ 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0549 704 PRINTS DnaJ domain signature 86 101 IPR001623 -
Dere05g0549 704 PRINTS DnaJ domain signature 102 122 IPR001623 -
Dere05g0549 704 PRINTS DnaJ domain signature 68 86 IPR001623 -
Dere05g0549 704 SMART dnaj_3 65 122 IPR001623 -
Dere05g0549 704 Coils Coil 407 447 - -
Dere05g0549 704 Pfam Domain of unknown function (DUF3444) 470 676 IPR024593 -
Dere05g0549 704 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Dere05g0549 704 SUPERFAMILY Chaperone J-domain 58 131 IPR036869 -
Dere05g0549 704 CDD DnaJ 66 119 IPR001623 -
Dere05g0549 704 MobiDBLite consensus disorder prediction 278 306 - -
Dere05g0549 704 Gene3D DnaJ domain 55 151 IPR036869 -
Dere05g0549 704 PANTHER BNAC03G44070D PROTEIN 1 693 - -
Dere05g0549 704 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0549 Dere-ChrDere05 8758847 8760961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0549 4 304 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.341 1.05e-30 122