Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0542 ATGTCTTCCTCATCTTCTGCATCACCATCTTCATCTCCACCTTCACCTTCTTCGCCACATCACTCTCCCAATCACAATGGTGCTGCTGATCCTGGCCCTAGCACAAGACGAGGCCGTGATTTTGACGCGCCGTCTTCGTCTCGTCCACGACGTGCTATGAATGCTGTCTGGCCTGAGCCTGTTCTCGAACTTCTAGCCACCCAAGTCGCCGTCGACGCCGCTCGCTCCAGTGGTCGTCTCTCTGCTGCTTCTGCACTTGCCAATGTCTTCCAGGTTTGTTCTACGTGGCACGCTGTGTCCCGCTCAGATCTCCTATGGCAGCGGCTCACCAGACGCATCTGGCGCCGCACCAATCGAACGCGAGACACGTGGCATGAAGAATTCATGCGATGGCATCGAACGGCCAGGAATTTCGCCACAGGGAGATACTCATACAACTCCCTGCATTTTGACCCGTCCGACGTTGACGACGGCGACCCCAGCACCCTCATCTGCCGTTGTCTCACCCTCTCCGACATCCACCTCGCTTGCGGCTTCGCCGACGGCACCGTCCGCCTCTTCGACCTCGAGACGCGTGTCCACGTCAGCACGTTTCGGTCCCACCAAGCCGACCGGTTCGGCCCCTTCTCGAGATCCGTTTCCGGCATTGTGATCACCAACAACCGCCTCGTCTTTGCCACGCTGGACGGGGACATCTACGTGGTACTTCTCGACGGGCCCGACAATCAGACACGTCGGGCCCGCGTCGGTGACGTAGTCAACAGCGGAGTTATGGTGGAGTTCGCGGGCTGCGGCCGCTGGTGGGTCGGACTTTTCGCCGGAGTCCCGGGTCGGGCAGTCCAAGTATGGGACGCTCACAACGAAGAACTTGTATTCTTCGGCTGGTCCTTGACGGACCCGGAAACCGTCCCGGGTTGGCACATGTTGACAGAGCTGGGCGAACCAGTGGGTCGGGTTCGGGTCACGACCCGGGAGCTAGCTGTCGCGTGCACGAGCTCACAGCTCATAGTGTTCGACCTGAGGAACCCGGGGATTTTACTGCATGAGCTATGGTCTACTGTAGGGGGCTTCATAGTGACGTCACTGGACGTGTGCCACGAGGCGTTCGTTATCGTGGAGAGTAACGGCGACGCCAAGGTGCGTCGGGCGAGCACGTTGGAGGTGCTGTGCGAGTTCCGTCTGCGAGTGCGAGGTCCTCTGAGGGGCTTGATGGGCTGTAGGAACACGGGGTACGTGCTGACATGCACCAGGGGAGTAGTGAGGGTGTGGGACGGGGAGCACCGGGTGGGACGACGGCGTTTCGTTCTGGGAGAAAGGGTGGGAGAGGCAAACGCCATGGTGTGCAGCGACAGACACGTGGCGATATCCTGTAGCGACACGTCGATACACCTATGGGATTTTGATGTATAG 1410 0.5965 MSSSSSASPSSSPPSPSSPHHSPNHNGAADPGPSTRRGRDFDAPSSSRPRRAMNAVWPEPVLELLATQVAVDAARSSGRLSAASALANVFQVCSTWHAVSRSDLLWQRLTRRIWRRTNRTRDTWHEEFMRWHRTARNFATGRYSYNSLHFDPSDVDDGDPSTLICRCLTLSDIHLACGFADGTVRLFDLETRVHVSTFRSHQADRFGPFSRSVSGIVITNNRLVFATLDGDIYVVLLDGPDNQTRRARVGDVVNSGVMVEFAGCGRWWVGLFAGVPGRAVQVWDAHNEELVFFGWSLTDPETVPGWHMLTELGEPVGRVRVTTRELAVACTSSQLIVFDLRNPGILLHELWSTVGGFIVTSLDVCHEAFVIVESNGDAKVRRASTLEVLCEFRLRVRGPLRGLMGCRNTGYVLTCTRGVVRVWDGEHRVGRRRFVLGERVGEANAMVCSDRHVAISCSDTSIHLWDFDV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0542 469 Gene3D - 136 255 IPR015943 GO:0005515
Dere05g0542 469 SUPERFAMILY WD40 repeat-like 146 467 IPR036322 GO:0005515
Dere05g0542 469 Gene3D - 77 135 - -
Dere05g0542 469 PANTHER WD40 REPEAT PROTEIN 12, 37 20 424 - -
Dere05g0542 469 MobiDBLite consensus disorder prediction 1 54 - -
Dere05g0542 469 SUPERFAMILY F-box domain 79 133 IPR036047 GO:0005515
Dere05g0542 469 Gene3D - 270 469 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0542 Dere-ChrDere05 8697137 8702392 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Dere05g0542 None None None