Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0444 ATGGTTTCTTCGAGGCTTCTTTCATGTCTTTTCTTTCTCCTTATCCTAACCCTAATATCTCATCAAGGCACTAATGCCCAGCCAAACTTCCTCAAATTCTACTGCGGTGGTAACCAAACAGCTAATGTCTCTAGTACTACTACCTACCAAAACAACCTCAAAACCCTTCTATTAAGCCTCTCCACCAACACACAGATCGACTATGGCTTCTACAACTTCTCCTACGGCGAAAACTCAGACCGAGTTAACGCCATCGCACTTTGCCGAGGAGACGTTAGGACCCCAGAAGACTGCCGGAGTTGCCTCTCAGATTCTAGGGTTCTTCTTCCCCAAGTGTGCCCTAACGTCACGGAGGCGATCGGGTGGTACGACAACTGCTTGCTGCGATACACGAACCGAACGATATTCAACGCCATGGAAACATCGCCCTTTTTCTATCTGTGGAACACTGAAGACGCTTTGGAGGTTGAAGCGTTCAAGAATGTTCGATCGGAGTTGATGGACAGACTGAGGATTACGGCTGCTTCCGGCAACTCGCTTCGTAAGTATGCGGCAGCGAATGCGAGTGGTCCGAGCAATCAGACCATATACGGTCTGGCGCAGTGCACGCCGGACTTGTCGAACGACGATTGCAATGTTTGCTTGGGTGGGGCTATCTCGGAGATTCCGAAATGCTGTAATGGGAATAAAGGTGGAAGAGTGGTTAGGCCCAGTTGCAACATTAGGTATGAGAGTTATAGTTTCTTTGAAACTGGTAATGATACACAACCATTGTTGCCGTCGCCGTTGTCACCGCTACCTCCTCTGTCACCACCGCGGTCACCGTCGCCTCCTCTGTTGCCACCACCTTCTCTGCCGGAACAAGGAAAGAGAAACACATCACGAATTGTTATTGCCATCGTTGTGCCAACTGTTGCCTTCATGGCAGTGCTCATTTTAATCTTCGTAATATGCTTTAAGGCAAGAAAGCAAAGGAACCAAATTGAAAGTGAATCTAAAGATATCATAACTGCTGACTCATTGCAAATGGATTTTGAAACCATAAGAGTGGCAACAAACGATTTTTCTAATGCAAATAAACTTGGAGAAGGTGGATTTGGACCTGTTTATATGGGTAGGTTGTATAATGGACAAGAGATTGCTGTAAAAAGGTTAAGTAGGGATTCTGGGCAAGGTGATATGGAGTTTAAGAATGAAGTGTTGTTAATGGCCGAGCTACAGCACCGGAATTTAGTTAAGCTACTTGGTTTCTGTCTTGAAAATGGAGAAAGAATACTTGTCTATGAGTTAGTTTCCAACAAAAGCCTTGATTACTTCATTTTTGATCCAACCAGGCAAGCAGAATTTGATTGGAAAACACGATACAAAGTCATAGAAGGCATTGCCCGGGGTCTTCTCTACCTTCATCATGATTCTCAAGTAAGAATTATTCATCGTGATCTCAAACCAAGCAATATACTTTTAGACGAAGAAATGAATCCTAAGATATCAGATTTCGGTATGGCAAGATTGTTTGTAGTGGATCAAACTCAAGATCGTACGAGCACAGTTGTTGGGACCTATGGATATTTGGCGCCTGAGTATATGAAGCGTGGAGTCTTTTCAATTAAATCAGATGTCTTTAGTTTTGGTGTGCTAGTTTTAGAAATAGTATGCGGTCGAAAAAATGGTGAATCCCATGACGGAGAGAATGTGGAGCATCTAGTAAGCGTGGCTTGGAAGAATTGGAAGGAACGGACATTGTCAAATATTGTAGATCCCATGTTGGTTGGTGGTGATGATTGTTCAAAGTATGAAATTATGAGATGCATCCACATAGGGTTACTTTGTGCTCAAGAAAATGAAAGTGTTAGGCCAACCATGGCTTCCATTGTACCAATGCTTAATAGCTATTCCTTCAGTCTGCCAATTCCTTTAGAACCTGCCTTTTATATGTGGAAATCTTTTCCAACTATGGAACCATTTCAATCTGCCGAAGGATCAATAAATGAGGCATCAATTACAGAACAATATCCTCGCTAG 2022 0.4332 MVSSRLLSCLFFLLILTLISHQGTNAQPNFLKFYCGGNQTANVSSTTTYQNNLKTLLLSLSTNTQIDYGFYNFSYGENSDRVNAIALCRGDVRTPEDCRSCLSDSRVLLPQVCPNVTEAIGWYDNCLLRYTNRTIFNAMETSPFFYLWNTEDALEVEAFKNVRSELMDRLRITAASGNSLRKYAAANASGPSNQTIYGLAQCTPDLSNDDCNVCLGGAISEIPKCCNGNKGGRVVRPSCNIRYESYSFFETGNDTQPLLPSPLSPLPPLSPPRSPSPPLLPPPSLPEQGKRNTSRIVIAIVVPTVAFMAVLILIFVICFKARKQRNQIESESKDIITADSLQMDFETIRVATNDFSNANKLGEGGFGPVYMGRLYNGQEIAVKRLSRDSGQGDMEFKNEVLLMAELQHRNLVKLLGFCLENGERILVYELVSNKSLDYFIFDPTRQAEFDWKTRYKVIEGIARGLLYLHHDSQVRIIHRDLKPSNILLDEEMNPKISDFGMARLFVVDQTQDRTSTVVGTYGYLAPEYMKRGVFSIKSDVFSFGVLVLEIVCGRKNGESHDGENVEHLVSVAWKNWKERTLSNIVDPMLVGGDDCSKYEIMRCIHIGLLCAQENESVRPTMASIVPMLNSYSFSLPIPLEPAFYMWKSFPTMEPFQSAEGSINEASITEQYPR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0444 673 CDD STKc_IRAK 361 629 - -
Dere05g0444 673 Gene3D Transferase(Phosphotransferase) domain 1 431 634 - -
Dere05g0444 673 SUPERFAMILY Protein kinase-like (PK-like) 342 654 IPR011009 -
Dere05g0444 673 FunFam Cysteine-rich receptor-like protein kinase 10 319 430 - -
Dere05g0444 673 FunFam Cysteine-rich receptor-like protein kinase 10 143 248 - -
Dere05g0444 673 MobiDBLite consensus disorder prediction 257 289 - -
Dere05g0444 673 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 135 - -
Dere05g0444 673 MobiDBLite consensus disorder prediction 260 285 - -
Dere05g0444 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Dere05g0444 673 SMART serkin_6 355 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0444 673 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Dere05g0444 673 ProSiteProfiles Gnk2-homologous domain profile. 31 135 IPR002902 -
Dere05g0444 673 Gene3D - 29 134 IPR038408 -
Dere05g0444 673 Gene3D - 141 248 IPR038408 -
Dere05g0444 673 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 666 - -
Dere05g0444 673 ProSiteProfiles Protein kinase domain profile. 355 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0444 673 Pfam Salt stress response/antifungal 35 132 IPR002902 -
Dere05g0444 673 Pfam Salt stress response/antifungal 157 246 IPR002902 -
Dere05g0444 673 Pfam Protein kinase domain 356 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0444 673 Gene3D Phosphorylase Kinase; domain 1 316 430 - -
Dere05g0444 673 FunFam cysteine-rich receptor-like protein kinase 10 431 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0444 Dere-ChrDere05 6747772 6752855 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0444 37 673 Receptor kinase-like Gene Family AT4G21410 46.737 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere05g0444 Pkinase 1.4e-46 CL0016