Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0441 ATGGCTGTGGCGAACCAAGCACCCCCATCCTCTACAACCATCGAAAGGGTCAACCCCAAAACGGTGGAACAAGCCGTGAAGTCCCTCCTGAAATGGAGGACTTCCAAGTCCCAGCACGAAAAGCCTAAGCTTTTTGATCAAGACGACGAGTTCTTCTACCTCATTCTCACCCTGAAGAAAATCCCGCAAAAGGATCGCGTTAATCCCTATAAGATTCTTCTCCCACGTTCTCTTCTCTCGGAATTCTCGGAGCTCTGTTTGATCATCGATGACAGACCCAAGTCAAATCTCACCAAAGAAGAGGCGCAGAAGAAGATCAAATCGGAAAACATACCCGTTTCGCAAGTCTTGAAGCTCTCCAAGCTCAAGTCCGATTATCGTCCGTTCGAGGCGAAGCGGAAGCTGTGTGATTCTTACAACATGTTTTTCGCGGACAAGAGGGTGATTCCGCTGTTGCCGAGGCTATTGGGTAAGCACTTCTATAAGAAGAAGAAGATTCCTGTGCCATTGGATTTGACGCATAAGAATTGGAAAGAGCAGATTGAGAAGGCGTGTTCTTCAGCATTGTTGTTTCTAGGGACAGGTACGTGTAGTGTGATGAGAGTAGCCAAAGTGTCAATGGATAAGGATGACATTGTTGAGAATGTGGTTGCTGCTATTAATGGTGTAGCAGAAATTGTGCCCAAAAAGTGGGGGAATGTAAGGTCGCTTCACTTGAAGCTCTTGGAGTCGCTTGCATTGCCTATATATCAGACAGTTCCAGATATGAAATTGAAGATTGAGGGAATTATAGACAAGGAAGCTCGGCTGGATGAGAAGGTGGAAGAAGGTAAGAAGGATCAGAAAGTGGGCAAGAAGAAAGGGAAAATTCATGAAGTTAGGTATATGGATTCTATTATTGGTGAGGAACTCAATAAAGTTAATGATTTAGATAGCGAAGATGATGCGAACATTGAGGAAGAAGATGGTGAGGATGAGGAAATGGGTAGTAGAATATTGATGGATAAGACAAGGAAGAAAGCAGATAAAATGGACAAGGATAAAGATGGGGTATAG 1056 0.4413 MAVANQAPPSSTTIERVNPKTVEQAVKSLLKWRTSKSQHEKPKLFDQDDEFFYLILTLKKIPQKDRVNPYKILLPRSLLSEFSELCLIIDDRPKSNLTKEEAQKKIKSENIPVSQVLKLSKLKSDYRPFEAKRKLCDSYNMFFADKRVIPLLPRLLGKHFYKKKKIPVPLDLTHKNWKEQIEKACSSALLFLGTGTCSVMRVAKVSMDKDDIVENVVAAINGVAEIVPKKWGNVRSLHLKLLESLALPIYQTVPDMKLKIEGIIDKEARLDEKVEEGKKDQKVGKKKGKIHEVRYMDSIIGEELNKVNDLDSEDDANIEEEDGEDEEMGSRILMDKTRKKADKMDKDKDGV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0441 351 Gene3D - 192 246 - -
Dere05g0441 351 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 24 244 - -
Dere05g0441 351 CDD Ribosomal_L1 22 249 IPR028364 -
Dere05g0441 351 Gene3D - 95 187 IPR016095 -
Dere05g0441 351 MobiDBLite consensus disorder prediction 313 328 - -
Dere05g0441 351 Pfam Ribosomal protein L1p/L10e family 38 244 IPR028364 -
Dere05g0441 351 SUPERFAMILY Ribosomal protein L1 16 250 IPR023674 -
Dere05g0441 351 MobiDBLite consensus disorder prediction 306 351 - -
Dere05g0441 351 MobiDBLite consensus disorder prediction 329 351 - -
Dere05g0441 351 FunFam Ribosomal protein L1p/L10e family 95 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0441 Dere-ChrDere05 6678074 6679129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0441 138 240 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 30.097 3.69e-09 54.7