Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0432 ATGAGGCATACAATTTTTCTAGATTCAGGTCTTTCCAGTTGGAAACATTTCAAATTTGCTATTGGTGACTGCACATTGGCAAGATACATGGAACAAAAGCAAGAACATGACAATGGAAACCAGAATAGGCACGGCATTGACGTTACCCTAATGTCTCCCAATGTCCCAAAAGTAGTCTCACCAGTTTCATCTGCAGTTGAGGGGGACACCATTCGGCGACCCCGGGGCCGGCCTGCCGGCTCCAAGAACAAGCCAAAGCCACCAATTATTGTGACTAGGGATAGTGCTAATGCACTTGGGGCTCAAGCCATGGAGGTGAGTTCTGGCTGTGATGTGAATGAAAGTTTGTTGAACTTTGCCAGGAGGAAGCAGCGTGGGATTTGCATACTCAGTGGAACTGGATGTGTGACAAATGTAACATTACGTCAACCAGCCTCCTCTGGTGCAATTGTGACCCTCCATGGCCGATTCGAGATTCTCTCGCTTCTCGGATCTATTCTGCCCCCGCCAGCGCCTCCTGGGATCACTAGTCTCACAATTTACTTAGCCGGTGCTCAAGGGCAAGTTGTCGGTGGAGGTGTGGTTGGTGCTTTAATTGCTTCAGGACCTGTTGTTATCATGGCAACATCGTTCATGAAGGCATCTTTTGATCGTCTTCCATTAGATGATGATGATGATGAAGTCATTGTTGCAATGCAGAACCAGCACTACCAGAATGGTCGCACCCACCATCATCATCACCATCTTGATATCTCAGATTTCTATGGAATGCCTCAGAACTTGCTCACAAATGGAACAATCCCCCATGAGATATACTCTTGGGCCCCGCCAGGAAGGAACTTGTCAAAAGCCTGA 855 0.4772 MRHTIFLDSGLSSWKHFKFAIGDCTLARYMEQKQEHDNGNQNRHGIDVTLMSPNVPKVVSPVSSAVEGDTIRRPRGRPAGSKNKPKPPIIVTRDSANALGAQAMEVSSGCDVNESLLNFARRKQRGICILSGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITSLTIYLAGAQGQVVGGGVVGALIASGPVVIMATSFMKASFDRLPLDDDDDEVIVAMQNQHYQNGRTHHHHHHLDISDFYGMPQNLLTNGTIPHEIYSWAPPGRNLSKA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0432 284 CDD DUF296 103 175 IPR005175 -
Dere05g0432 284 Gene3D - 102 249 - -
Dere05g0432 284 ProSiteProfiles PPC domain profile profile. 96 236 IPR005175 -
Dere05g0432 284 PIRSF ESCAROLA 21 284 IPR014476 GO:0003680
Dere05g0432 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 244 IPR014476 GO:0003680
Dere05g0432 284 FunFam AT-hook motif nuclear-localized protein 99 242 - -
Dere05g0432 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 225 - -
Dere05g0432 284 MobiDBLite consensus disorder prediction 61 88 - -
Dere05g0432 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 211 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0432 Dere-ChrDere05 6591081 6592290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0432 20 283 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 63.396 2.80e-101 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0432 05 6591081 6592290 Dere05g0432 05 6591081 6592290 ECH