Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0430 ATGGCAAATAATGACAAGGGCCTTTCTCATATGGATCCTTTCTATTACAACCACCATGAGGTCCCAATTCAATCATTTAGCTTTCCATTCTTTAGAGACAACCTTGAAAGCTTGATCAGTGACTCCATGAATGGCTCTGTAGATCACTGTCATAAGACTCTCTCATCAAGAGCCTTTGACCTATCTTGCTCATCATCTGATGTGATCTCTGCAACCTCCATAGATAATCACAAACCAAACAAGCCCAACGGAGGGGACTCCGTGGGGATCATCGGCAACCCCTTATCGTCGCCGAATTCATCGGTGTCTTCGTCGTCTAATGAGGCCAAAGCAGTAGTAACAGAAGAACCAGCGGCGGATAAGCAGCCAAAAGGGTCTGAAGAAAATCATGGCGATGAAAAGTCCATGAGCAAGAAAAGGAAGAAAGAGAGAAAGGAAAGAGAGGCACGCTTTGCCTTCTTGACGAAAAGTGAGAGGGATGTGCTTGAAGATGGGTACAGATGGAGAAAATATGGACAAAAAGCAGTGAAGAATAGTCCTTACCCAAGGAGTTATTACAGATGCACGAGTGAGAGATGCAGAGTGAAGAAGAGGGTGGAGAGGTCAGTCCAGGATCCATCAATGGTGATCACAACGTATGAAGGGCAGCACAAGCATCACAGCCCAGCCACACTTAGAGCCAACATTGCTGCTTCTGCAATCTTCTCATCTTCTTCCTCGTTCTTAACTTCAAGCAACCTTTCCCAGCATCTTATGCCTCACTTTCTTCCTAGCTATGGCCATAGCCATCAACATCTCAATCTCATCTCACACCAAACCCTAATTTCCCAGCATGACCACCTCAGTGATAATGGGTTGTTGCAAGATCTGCTACTACCCTCATTGTTCCCTCGTACACAGCAATAG 906 0.4558 MANNDKGLSHMDPFYYNHHEVPIQSFSFPFFRDNLESLISDSMNGSVDHCHKTLSSRAFDLSCSSSDVISATSIDNHKPNKPNGGDSVGIIGNPLSSPNSSVSSSSNEAKAVVTEEPAADKQPKGSEENHGDEKSMSKKRKKERKEREARFAFLTKSERDVLEDGYRWRKYGQKAVKNSPYPRSYYRCTSERCRVKKRVERSVQDPSMVITTYEGQHKHHSPATLRANIAASAIFSSSSSFLTSSNLSQHLMPHFLPSYGHSHQHLNLISHQTLISQHDHLSDNGLLQDLLLPSLFPRTQQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0430 301 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 248 IPR044810 GO:0003700
Dere05g0430 301 SUPERFAMILY WRKY DNA-binding domain 155 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0430 301 MobiDBLite consensus disorder prediction 114 139 - -
Dere05g0430 301 FunFam WRKY transcription factor 57 148 222 - -
Dere05g0430 301 Pfam WRKY DNA -binding domain 163 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0430 301 MobiDBLite consensus disorder prediction 71 148 - -
Dere05g0430 301 MobiDBLite consensus disorder prediction 90 111 - -
Dere05g0430 301 Gene3D WRKY domain 147 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g0430 301 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g0430 301 SMART WRKY_cls 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0430 Dere-ChrDere05 6560513 6562931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0430 94 300 WRKY Transcription Factor Family AT1G29860 41.797 2.38e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere05g0430 WRKY 1.8e-25 CL0274