Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0428 ATGTCATCCAATAGTTCTTTGAAAACCGGACTGTCAAAGAAGATTTTGGGTGTGAGAGTATGGGTTTTAATTGGGATTGGCGTTGGCGTGTTTATAGTGCTGATTCTTTGTATATTATCAGTATGGGTGATGTTTCGGAGAAAGTCAAAGAGATCACTGGACGGGTATTCACTATCCCAAATACCAAATGTCTCAAAAGATATCAAGGTCGACAAGGTTGGGGTGCAGATTTCTCATGATCACCCAGAAAGCGTAATTATTCCTGTTCATGACAAGGCAAGTGATAAGAATTCAGATAAGATGTTAGCTCACTTGGGTATGAGCAAATCCAGTGATCATGACAATATCAGTCAGTGCAGCTCAATTTGTCATCATGAGAGAGGATTTAGTTCACTGTCAGGGGAAGAAGGAAGCTCCGGGACTGTTAAAAAGCAATCTTTGTCATATGGAGGGCTTGTGACTGCCTCTCCTCTAGTTGGCTTGCCAGAAGTTTCTCATCTTGGATGGGGCCACTGGTTTACACTTCGGGATCTGGAACTAGCAACAAAGCGTTTCTCAGCTGAAAATGTCCTAGGTGAGGGTGGATATGGGGTTGTTTACAAGGGCAGGCTGATCAATGGAACTGAGGTGGCAGTGAAGAAAATTCTTAATAACTTGGGACAGGCAGAGAAAGAATTCAGGGTAGAAGTGGAAGCTATAGGCCATGTACGACATAAAAATCTTGTGCGCCTGCTTGGATACTGCATAGAAGGAGTTCACAGGCTTTTGGTGTACGAATATGTGAATAACGGTAATTTAGAACAATGGTTACATGGGGCTATGCGCCAACATGGGACTCTTACATGGGAGGCTCGCATGAAAGTTGTACTTGGCACTGCCAAAGCGCTTGCTTACTTGCATGAAGCAATAGAACCAAAAGTTGTTCACCGGGATATAAAGTCTAGCAACATATTAATTGATGATGAGTTCAATGCGAAGGTTTCTGATTTTGGATTGGCCAAACTTTTGGATTCAGGAGAAAGCCACATAACGACTAGAGTAATGGGAACGTTTGGTTATGTGGCACCAGAGTATGCTAATACTGGTTTGTTAAATGAGAAGAGTGACATCTACAGCTTTGGTGTTCTCCTGTTGGAAGCAGTAACTGGAAGGGACCCTGTTGACTATGCTCGTCCTGCTAATGAGGTTAATCTTGTTGAATGGCTTAAGATGATGGTGGGGACAAGAAGAGCTGATGAAGTTGTAGATCCAAGCCTTGAAGTTAAGCCATCAACACGAGCTTTAAAGTGTGCTCTTCTGGTTGCACTTAGGTGTGTTGATCCTGATGCAGAAAAGAGACCCAAAATGAGTCAGGTTGTGAGAATGCTAGAAGCTGATGAATATCCCTTCCGAGAGGATCGGAGGAATAGAAAGAGCCGCACTGCCAGCATGGAAATTGAATCCATGAAGGATATTTCTGGTTCATCTGAAGCAGAACAGAAGGCAGGGGATTCTGGAAGCCGAGCACCGGATACAACAGAGGGGTAG 1527 0.4368 MSSNSSLKTGLSKKILGVRVWVLIGIGVGVFIVLILCILSVWVMFRRKSKRSLDGYSLSQIPNVSKDIKVDKVGVQISHDHPESVIIPVHDKASDKNSDKMLAHLGMSKSSDHDNISQCSSICHHERGFSSLSGEEGSSGTVKKQSLSYGGLVTASPLVGLPEVSHLGWGHWFTLRDLELATKRFSAENVLGEGGYGVVYKGRLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGAMRQHGTLTWEARMKVVLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTRRADEVVDPSLEVKPSTRALKCALLVALRCVDPDAEKRPKMSQVVRMLEADEYPFREDRRNRKSRTASMEIESMKDISGSSEAEQKAGDSGSRAPDTTEG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0428 508 CDD STKc_IRAK 191 457 - -
Dere05g0428 508 Gene3D Transferase(Phosphotransferase) domain 1 261 474 - -
Dere05g0428 508 SUPERFAMILY Protein kinase-like (PK-like) 169 458 IPR011009 -
Dere05g0428 508 Coils Coil 205 225 - -
Dere05g0428 508 ProSiteProfiles Protein kinase domain profile. 185 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0428 508 Pfam Protein kinase domain 187 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0428 508 FunFam Putative receptor-like protein kinase 167 260 - -
Dere05g0428 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Dere05g0428 508 MobiDBLite consensus disorder prediction 479 508 - -
Dere05g0428 508 MobiDBLite consensus disorder prediction 463 508 - -
Dere05g0428 508 SMART serkin_6 185 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0428 508 Gene3D Phosphorylase Kinase; domain 1 166 260 - -
Dere05g0428 508 PANTHER OS01G0323000 PROTEIN 1 482 - -
Dere05g0428 508 ProSitePatterns Protein kinases ATP-binding region signature. 191 214 IPR017441 GO:0005524
Dere05g0428 508 MobiDBLite consensus disorder prediction 463 478 - -
Dere05g0428 508 FunFam Putative receptor-like serine/threonine-protein kinase 261 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0428 Dere-ChrDere05 6545184 6548781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0428 17 459 Trihelix Transcription Factor Family AT1G70460 40.312 1.27e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere05g0428 Pkinase 7.7e-49 CL0016