Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0393 ATGGATAGTACTGAAGCTGGGAAAGGTGACACAAACTTCACTGTAACAGTTACCAAGGAGGAGGTGGTGGCTGCGGTGTTGCCATTACAGGAACACTGGCTCCCACTCTCCAACCTCGACCTGCTTCTCCCGCCGGTCGACGTCGGCGTCTTCTTCTGTTACAACAAACCCATCACTGTTACCACTGCCCCCATTACCACTATCGTCGAGCCCACTGCTCTGGCGGGGGCTCTGAAGAAGGCGTTGACTCAGGCTTTGGTTTCCTTCTACGCCTTCGCCGGCGAGGTGGTGACCAACTCTGCGGGCGAACCCGAGCTACTCTGCAACAACCGTGGGGTTGATTTTGTGGAAGCTGAGGCTGATGTTGAGCTGAGATGCCTGGACTTATACAACCCAGATGAGTCCGTTGAAGGCAAGCTTGTTCCTAAGAAGAAACATGGCGTGCTTGCTGTACAGGCAACATTCTTCAAGTGTGGTGGTTTAGTAGTGGCATGCACTTTCGATCACCGCATAGCCGATGCCCATTCATCCAACATGTTCCTCGTCTCATGGGCTGAGATGGCCCAGCTCAACAAGCCCAATATCTCCACTTCCCACGATCTCGCTCTTCCATGGCAGCCATGTTTCCGGCGATCTCTGCTCAGCCCACGACGGCCCGGTCGCATCCACCCCTCCCTCCACGACATGTACGTTCCCTTCTCTTACCTCCCCCCTCCGAAGAAACCCGAACCCGGACCCAAATCCGACCCTCTTATCAGTCGGATCTACTACATCACTGCCGACGAACTTAACCACATTCAATCACTTGCAAACTCAGAGGTTACTATTAATGGTGTGAAACGAACCAAGCTTGAGTCTTTCTGTGCGTTATTATGGAAGATGGTTGCTGCTAGTGCTGATAGCAAAAGGGTTATTGCAAAAATGGGGATAGTGGTGGACGGAAGGAAGAGGCTAAGCAATGGGGGCGACAAAGAGAAAGCGTCGCTTCTGGATTCGTATTTTGGGAACGTGCTTTCAATACCGTTCGGAGGAAAGCCGGCGGAGGAGCTGACTGAGAAGCCGTTGAGTTGGGTGGCGGGTGAGGTTCACGAGTTCTTGGAGGCGGCAGTGACGGAGGAGCATTTCCTGAGCCTCATAGATTGGGTTGAGGCTCACCGCCCTGCAGCCGGGTTGGCAAGGATATATTGCGGCGGATGCTGCGGCAGCGGCGTCGCAGATGGAGAAGCAGAAGATGGGCCGGCTTTTGTGGTTTCGTCCGGGCAGAGGTTCCCGGAAGCTAAGGTGGATTTCGGGTGGGGGAAGCCGGTGTTTGGGTCGTATCATTTCCCGTGGGGCGGCGACGCTGGATATGTGATGCCGATGCCAAGCCCGGCCGGGAACGGTGACTGGGTGGTGTACATGCACCTTCGGAAGGGGCAGTTGGAGAAGATAGAGTGTGAGGCTCCTCATGTATTTAGGCCCTTAACTTGGGATTATCTTAGTTATTGA 1488 0.543 MDSTEAGKGDTNFTVTVTKEEVVAAVLPLQEHWLPLSNLDLLLPPVDVGVFFCYNKPITVTTAPITTIVEPTALAGALKKALTQALVSFYAFAGEVVTNSAGEPELLCNNRGVDFVEAEADVELRCLDLYNPDESVEGKLVPKKKHGVLAVQATFFKCGGLVVACTFDHRIADAHSSNMFLVSWAEMAQLNKPNISTSHDLALPWQPCFRRSLLSPRRPGRIHPSLHDMYVPFSYLPPPKKPEPGPKSDPLISRIYYITADELNHIQSLANSEVTINGVKRTKLESFCALLWKMVAASADSKRVIAKMGIVVDGRKRLSNGGDKEKASLLDSYFGNVLSIPFGGKPAEELTEKPLSWVAGEVHEFLEAAVTEEHFLSLIDWVEAHRPAAGLARIYCGGCCGSGVADGEAEDGPAFVVSSGQRFPEAKVDFGWGKPVFGSYHFPWGGDAGYVMPMPSPAGNGDWVVYMHLRKGQLEKIECEAPHVFRPLTWDYLSY 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0393 495 Gene3D - 12 232 IPR023213 -
Dere05g0393 495 Gene3D - 238 479 IPR023213 -
Dere05g0393 495 Pfam Transferase family 14 481 - -
Dere05g0393 495 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0393 Dere-ChrDere05 5663677 5666479 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0393 37 478 Monolignol Biosynthesis Gene Families AT5G48930 27.655 1.82e-36 138