Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0385 ATGAGGAAATCAAGATTGGAGACTTATGAGAGGTGGGGTTGGTCTCAAAGTGTTGTTCTTTCAGCATTCAAAAGGCATCCAAATTGTATGTTACAATCTGTAGAGAAGATAAATAAGGTGATGAATTTTCTAGTGAATGAAACGGGTTATCGATCAGAATATATTGCTTTATTCCCTGCAGTTTTGGCTTATAGCCTGGAGAAGAGGATTATCCCTAGATGCTTGGTTGTTCAGACTTTGAAATCTAAAGGTTTGGTTAAGAATGACTTGAGCCTTCAAGCTTTCATTCGACAACCTGAGAAAAACTTTATCAAGTGCTTTGCGGGTAGATTTCAGGACCCAGATAATGTGACAGAGTGCCACCATGATAAGCACAAAATATTATGTGCTACTGCTGTTAATCTACAGTGTGCAAGTTTGGGTGTCAGTGAAACATTCTTTCTGCCAGTAGCTTTGCTTCAAACTGATAATATTCCTTTGGGAAGTCAATCAGGAAAGTCAACTACATGCTTTCTGTTCTAA 522 0.3831 MRKSRLETYERWGWSQSVVLSAFKRHPNCMLQSVEKINKVMNFLVNETGYRSEYIALFPAVLAYSLEKRIIPRCLVVQTLKSKGLVKNDLSLQAFIRQPEKNFIKCFAGRFQDPDNVTECHHDKHKILCATAVNLQCASLGVSETFFLPVALLQTDNIPLGSQSGKSTTCFLF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0385 173 Gene3D Transcription termination factor 3, mitochondrial 2 113 IPR038538 -
Dere05g0385 173 SMART mt_12 52 86 IPR003690 GO:0003690|GO:0006355
Dere05g0385 173 SMART mt_12 20 51 IPR003690 GO:0003690|GO:0006355
Dere05g0385 173 Pfam mTERF 4 103 IPR003690 GO:0003690|GO:0006355
Dere05g0385 173 PANTHER CGI-12 PROTEIN-RELATED 5 107 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0385 Dere-ChrDere05 5526419 5528607 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere05g0385 mTERF 4.5e-16 No_clan