Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0383 ATGCCTACGAGGAAGACGCAATTAGGGTTTCTTATCCATGATGTCTTCGTTGATGTCTGTTCATTCACTTCAGTGAGCTGCTCTGAACCAAACGGCAAATTGAAGAAACGAAGAATTGTCAAGTATTACCCTAAGATTCTTCGACATAATCCTAAGGCAAACCTTTTTCCTAAGCTCAAGTTCTTGCAGTCTACAGGGATTTCAGGTGCTGACATCCCAGAATTCCTGGTTTCTAATCCGTTGATATTACGAAGGAGCATTGATGAGTTCCTAATCCCCCGTTATGAAATACTGAAGCAAGTGCTTCCTAATGATAAGGATGTTATCAAATCTTTGAAATGTGGAATACGATATAGCATTTATAAAGCATACAAAGTTATTGAAGCTGTGAATTTGGCTAGGAAAATGGGATTTGATCCTGCAAAATCATCATTTGTCTTAGCCATCCAAGGGCTGGCAAAGGCGAAGCCATACATGTGGAAATCAAGATTGGAGACTTACGAGAGGTGGGGTTGGTCTGCAAGTGTTGTTCTTTCGGCATTCAGAAGGTTTCCAAATTGTATGTTATTATCTGAAGAGAAGATCACTAAGGGGATGAATTTTCTTGTGAATGAAATGGGTTATCAATCAGAAGATATTGCTTTAGCCCCAGCAGTTCTGTCTTTTAGCCTGGAGAAGAGGATTGTCCCTAGATGCTTGATGATTCAGACTTTGAAATCTAAGGGTTTGGTTAAGAATGATATAAGCCTTGGTACTTTCCTTTTTAAAACTGAGAAAAACTTTATCAAGTGCTTTGTGGGCAGATTTCAGGACTCAGATGACGGTAAGATGGGCCCTTCTGCTGCTATTCAGTCTTAG 858 0.3986 MPTRKTQLGFLIHDVFVDVCSFTSVSCSEPNGKLKKRRIVKYYPKILRHNPKANLFPKLKFLQSTGISGADIPEFLVSNPLILRRSIDEFLIPRYEILKQVLPNDKDVIKSLKCGIRYSIYKAYKVIEAVNLARKMGFDPAKSSFVLAIQGLAKAKPYMWKSRLETYERWGWSASVVLSAFRRFPNCMLLSEEKITKGMNFLVNEMGYQSEDIALAPAVLSFSLEKRIVPRCLMIQTLKSKGLVKNDISLGTFLFKTEKNFIKCFVGRFQDSDDGKMGPSAAIQS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0383 285 Gene3D Transcription termination factor 3, mitochondrial 33 271 IPR038538 -
Dere05g0383 285 SMART mt_12 37 68 IPR003690 GO:0003690|GO:0006355
Dere05g0383 285 SMART mt_12 210 244 IPR003690 GO:0003690|GO:0006355
Dere05g0383 285 SMART mt_12 73 105 IPR003690 GO:0003690|GO:0006355
Dere05g0383 285 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Dere05g0383 285 PANTHER CGI-12 PROTEIN-RELATED 37 267 IPR003690 GO:0003690|GO:0006355
Dere05g0383 285 Pfam mTERF 161 261 IPR003690 GO:0003690|GO:0006355
Dere05g0383 285 Pfam mTERF 37 138 IPR003690 GO:0003690|GO:0006355
Dere05g0383 285 FunFam Mitochondrial transcription termination factor-like 52 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0383 Dere-ChrDere05 5512164 5513292 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere05g0383 mTERF 7.4e-19 No_clan