Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0382 ATGCTAAAAGTTCCCATTTCAAGATTAATAGCTTCAAACCGATATATACCTACGAGGAAAACCCAATTATGGTTTCTTATCCATAATGTCTTCGTTGATTTCTGTTCATTCACTTCGGTATGCTCGTCTGAACCAAACGACAAATTGAAGAAACGAAGGTATCAGGAAGAAGATCCCTTCACAGTCTCTTACCTGATCAACTCTTGTGGGCTTCCCCCGAAGATAGCCATCCGAGCATCCAGAGGTGCTGACCTCCCAGAATTCCTGGTTTCTAATCAGTTGATATTACGGAGGAGCATTGATGAGTTCCTTATCCCCCGTTATGAAATACTGAAGCAAGTGCTTCCCAATGATAAGGATGTTTTCAAATCTTTGAAATGTGGAATACGGTCTTTACCAAATGTTGCAGATGATATAGTTCCAAACATTAGACTTTTGAGAGAAGTTGGAGCGTCTCGATCATCTGTCTGTCTGTTGGTAATATATTATTCAGATATAGCATTTATGAAGCACACAGAGTTTATTGAGGTTGTGAATTTGGCTAGGAAAATGGGATTTAATCCTGAAAAATCATCATTTGTCTTAGCCATCCAAGTGCTTGCCAAGGTGAAGCCATACATGTGGAAATCAAGATTGGAGACTTATGAGAGGTGGGGTTGGTCTGAAAGTGTTGTTCTTTCAGCATTCAGAAGGTATCCAAATTGTATGTTACAATCTGTAGAGAAGATGAATAAGGTGATGAATTTTCTAGTGAATGAAATGGGTTATCGATCAGAAGATATTGCTTTAGTCCCAGCAGTTCTGTCTTTGAGCCTGGAGAAGAGGATTATTCTTAGATGCGTGATTATTCAGACTTTGACATCTAAGCGTTTGGTTAAGAATGATATAAGCCTCGGTACTTTCCTTCTAAAATCTGAGAAAAACTTTATCGAGTGCTTTGTGAGTAGATTTCAGGACCCAGATGAGGGTAAGATGGGCCCTTCAGGTGCTATTCAGCCTCTGTAG 1005 0.396 MLKVPISRLIASNRYIPTRKTQLWFLIHNVFVDFCSFTSVCSSEPNDKLKKRRYQEEDPFTVSYLINSCGLPPKIAIRASRGADLPEFLVSNQLILRRSIDEFLIPRYEILKQVLPNDKDVFKSLKCGIRSLPNVADDIVPNIRLLREVGASRSSVCLLVIYYSDIAFMKHTEFIEVVNLARKMGFNPEKSSFVLAIQVLAKVKPYMWKSRLETYERWGWSESVVLSAFRRYPNCMLQSVEKMNKVMNFLVNEMGYRSEDIALVPAVLSLSLEKRIILRCVIIQTLTSKRLVKNDISLGTFLLKSEKNFIECFVSRFQDPDEGKMGPSGAIQPL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0382 334 FunFam Mitochondrial transcription termination factor-like 100 320 - -
Dere05g0382 334 Pfam mTERF 209 309 IPR003690 GO:0003690|GO:0006355
Dere05g0382 334 Gene3D Transcription termination factor 3, mitochondrial 82 319 IPR038538 -
Dere05g0382 334 SMART mt_12 258 292 IPR003690 GO:0003690|GO:0006355
Dere05g0382 334 SMART mt_12 31 72 IPR003690 GO:0003690|GO:0006355
Dere05g0382 334 SMART mt_12 86 118 IPR003690 GO:0003690|GO:0006355
Dere05g0382 334 SMART mt_12 226 257 IPR003690 GO:0003690|GO:0006355
Dere05g0382 334 PANTHER CGI-12 PROTEIN-RELATED 80 316 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0382 Dere-ChrDere05 5491641 5492818 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere05g0382 mTERF 7.8e-17 No_clan