Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0375 ATGCTTACCTTATTGATAACCCCAATTATAAGGGTATATGGGAGCCTCGAGATATTCCAAACTCGGGGCTACTTCCAGCTTGAGAAATATGATTTCGAGCTTATTGGTGTTATCGTTGAGGTTAATGTGATAAAACTCATTAAAGAGCAAATTGTTAATGTTGCTTATGGTTTGTCCAAGAAATCTTTGAGTTTTAGTGAACAGAATGTGCCTATCTTCAACCTAAGAGGTGGTATTTTTTATATTTCTTTGATCACAATTGAAGAGGGGATTTTCAAAGTGAAGGCTATTATTGGTGTTACGCACTTGGGAGGTGAAGATTTGGACAACATGTTTGTAAATCACTTGGTAGTAAAGTTTAAGAGGAAGCGTAATATGAATGATTTAAATGGTCCTGATAAGGTTGTCAGTGCTTTCCTAGGGGAAAAGACCATTGAGCTCGATCTTTTGTTGGTTAAGCAGATTACTTTTGATCTTTCTAATTTTGTCAGTTCTAGAAGGGACAAAAAACCAGAAGAAATGAGTTAG 528 0.3598 MLTLLITPIIRVYGSLEIFQTRGYFQLEKYDFELIGVIVEVNVIKLIKEQIVNVAYGLSKKSLSFSEQNVPIFNLRGGIFYISLITIEEGIFKVKAIIGVTHLGGEDLDNMFVNHLVVKFKRKRNMNDLNGPDKVVSAFLGEKTIELDLLLVKQITFDLSNFVSSRRDKKPEEMS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0375 175 Gene3D Actin; Chain A, domain 4 104 132 - -
Dere05g0375 175 Gene3D - 61 103 - -
Dere05g0375 175 Gene3D - 36 60 - -
Dere05g0375 175 SUPERFAMILY Actin-like ATPase domain 67 130 IPR043129 -
Dere05g0375 175 PANTHER HEAT SHOCK PROTEIN 70KDA 36 132 IPR013126 GO:0005524|GO:0140662
Dere05g0375 175 Pfam Hsp70 protein 38 131 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0375 Dere-ChrDere05 5413927 5414534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0375 36 131 Calmodulin-binding Proteins AT5G02500 56.701 8.06e-28 106