Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0348 ATGGCTTCCTCTTCTTCTTCATCTTCTTTCGGTTTTCTGTTTTTTCACTTCCTTCTTCTTCTTCTGTGCCTCGTAAGCCCTTCTTCTGTTTCATCACTTCCTCTGTTATCTCTCAAAAGGCAAGCTTCAATCTTGGTTTCTCTCAAACAAGGCTTTCAAGCTCAGAATTCGTCTTTTGAAACCTGGGATGTGTCTAACTACCTGTCCCTTTGTTCTTGGGTCGGCATCAAATGTGACCGTTACAACAGGTCCGTGGTGTCCTTGGACATATCCAATTTCAACGTTTCTGGGTTTCTTTCCCCTGCTATCACGGAGCTCCAGGGCCTTGTTGATGTATCGGTCGCGGGAAACAGCTTTTCCGGGGAGTTTCCGACAGAGATTCACCGGCTGACGAGGCTGCGATTCCTAAACATATCCAACAACGCGTTCAATGGGAAACTCAGTTGGGAATTCTTCCTCATGAGCCAGCTTGAGGTTCTGGATGCTTATGACAACAACTTCAATGGTTCACTCCCTCTTGGTGTCACCAGCCTGCCCAAGGTCAAGCACTTGAATTTTGGCGGGAATTACTTTTCCGGGAAAATCCCAGAAGCATACGGGAAAATGGTGGGGCTGAGTTATCTTTCTCTTGCAGGGAATGATCTAAATGGGATTATACCCAGTGAGCTTGGGAATCTCACTAATTTGACCCATTTATTCCTGGGATATTTCAACCAGTTTGATGGTGGAATCCCAAGTGAATTAGGGAATCTAATCAATTTGGTTCATCTAGACCTTGCAAATTGTGGCCTGAAAGGAACAATCCCACCAGAATTAGGCAAGCTTTCAAAATTAGACACACTTTTCTTGCAAACCAATCAGCTCACTGGTTCAATCCCTCCTCAGATAGGCAATTTGAGCAGCTTGAGATCTCTTGATCTTTCCAACAACGAGTTGAGTGGAGAAATCCCATTTGAATTCTCAAACCTCCGTGAGCTCAGACTCATTAACTTGTTCATCAACAAATTGCATGGTGAGATTCCTCAGTCCATCTCTGAGCTTCCAAAGCTTGAAACTTTACATCTATGGCAGAACAACTTCACAGGTTCAATCCCTCCAAGGCTTGGCCAGAATGGGAAATTAACTGAGCTTGATCTTTCAACAAATAAGCTAACTGGGTCTGTCCCAAAATCCCTTTGCCTTGGGAAGAAGCTCAAGATCTTGATCCTGCTCAATAATTTTCTCTTTGGATCTTTGCCTGATGATCTTGGACAATGCTACACACTTCAAAGAGTTCGTTTGGGTCAGAACTATTTAACAGGGAAAATACCAAACGGGTTTCTTTATCTGCCTGAACTTTCACTTCTTGAGCTGCAGAACAACTATCTCACAGGTGTTCTTCCTCAACATTCAACAGATTTACCGTCAAAACTAGCGCAGATGAATCTCTCAAACAATCGCCTATCCGGGTCTCTACCAGAATCAATTGGGAATTTCCCAAACTTGCAGATTCTTCTCCTCGGTGGAAACAGATTTTCTGGAGAAATCCCACCAGACATAGGGAGGTTGAAGAATTTGTTAAAGTTGGATATGAGCAGAAACAACATATCAGGTAGTATTCCTTCAGAGATAGGAAACTGCGTGTTGCTCACTTACTTAGACTTAAGCCAGAATCAACTTTCAGGTCCTATCCCAGTTCAAATCTCCCAAATTCACATCTTAAACTATCTTAATGTCTCATGGAACAACCTTAACCAGAGCCTTCCAAAAGAACTAGGGACCATGAAAGGTTTAACCTCAGCAGATTTCTCCCACAATAACTTCTCTGGTGCAATTCCTGACATTGGGCTGTTCACGGTCTTGAATTCAACTTTCTTTCAGGGAAACCCAAATCTGTGTGGGTATGATCTAAACCCATGTAACACTCACTCATCAAACTCACTTTCAGATTCTCACGTGACAAACAGTACAAAATCTGGAGTTCCTGGGAAATACAAGCTTCTTTTTGCAATTGCTCTGTTGGGATGTTCTTTAATTTTTGTAGCCTTAGCTATCATCAAAAGCAGAAAAAAGGCAAGAAGGAATTCTCATTCATGGAAGCTCACGGCATTTCAGAAGCTAAAATATGGGAGTGAAGACATATTGGGATGCATAAAGGAGAGCAATGTGATAGGTAGAGGCGGAGCTGGGATTGTGTACAGAGGGACCATGCCAAATGGTGAGGAGCTAGCAGTCAAAAAACTCTTAGGGATCAACAAAGGCTCTTCTCATCATGACAATGGCTTATCTGCAGAAATAAGGACATTGGGTAGGATAAGGCATAGGTACATTGTGAGGTTACTAGCTTTTGTTTCAAACAGAGAGACAAATTTGCTTGTTTATGAGTATATGCCAAATGGGAGTTTAGGGGAAGTGCTTCATGGAAAGAGAGGTGAGTTTTTGAAGTGGGAAACCAGGCTTAAGATAGCCATTGAAGCAGCAAAAGGGCTTTGTTATTTGCACCATGATTGTTCACCATTGATAATACATAGGGATGTGAAGTCAAATAACATATTGTTAAACTCTGAATTTGAGGCTCATGTGGCTGACTTTGGGCTTGCCAAGTTCTTGCAAGACACTGGTGCATCGGAGTGCATGTCTTCCATTGCTGGTTCTTATGGCTATATTGCTCCGGAGTATGCATACACACTGAAAGTTGATGAGAAGACTGATGTGTATAGCTATGGGGTGGTGCTGCTAGAGCTGATAACAGGAAGAAGGCCAGTGGGAGATTTTGGAGAAGAAGGACTGGACATTGTTCAGTGGACAAGGATCCAAACCAACTGGAGCAAAGAGAAAGTGGTGAGGATTCTTGATGAGAGGCTGCACAATGATATCCCCATTGATGAAGCCAAGCAAATGTTCTTTGTGGCCATGCTCTGTGTTCAGGAACACAGTGTGGAGAGACCTACCATGAGAGAAGTGGTTGAAATGCTCGCACAAGCAAAGCAGCCCAACACATTTTAA 2985 0.4295 MASSSSSSSFGFLFFHFLLLLLCLVSPSSVSSLPLLSLKRQASILVSLKQGFQAQNSSFETWDVSNYLSLCSWVGIKCDRYNRSVVSLDISNFNVSGFLSPAITELQGLVDVSVAGNSFSGEFPTEIHRLTRLRFLNISNNAFNGKLSWEFFLMSQLEVLDAYDNNFNGSLPLGVTSLPKVKHLNFGGNYFSGKIPEAYGKMVGLSYLSLAGNDLNGIIPSELGNLTNLTHLFLGYFNQFDGGIPSELGNLINLVHLDLANCGLKGTIPPELGKLSKLDTLFLQTNQLTGSIPPQIGNLSSLRSLDLSNNELSGEIPFEFSNLRELRLINLFINKLHGEIPQSISELPKLETLHLWQNNFTGSIPPRLGQNGKLTELDLSTNKLTGSVPKSLCLGKKLKILILLNNFLFGSLPDDLGQCYTLQRVRLGQNYLTGKIPNGFLYLPELSLLELQNNYLTGVLPQHSTDLPSKLAQMNLSNNRLSGSLPESIGNFPNLQILLLGGNRFSGEIPPDIGRLKNLLKLDMSRNNISGSIPSEIGNCVLLTYLDLSQNQLSGPIPVQISQIHILNYLNVSWNNLNQSLPKELGTMKGLTSADFSHNNFSGAIPDIGLFTVLNSTFFQGNPNLCGYDLNPCNTHSSNSLSDSHVTNSTKSGVPGKYKLLFAIALLGCSLIFVALAIIKSRKKARRNSHSWKLTAFQKLKYGSEDILGCIKESNVIGRGGAGIVYRGTMPNGEELAVKKLLGINKGSSHHDNGLSAEIRTLGRIRHRYIVRLLAFVSNRETNLLVYEYMPNGSLGEVLHGKRGEFLKWETRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGASECMSSIAGSYGYIAPEYAYTLKVDEKTDVYSYGVVLLELITGRRPVGDFGEEGLDIVQWTRIQTNWSKEKVVRILDERLHNDIPIDEAKQMFFVAMLCVQEHSVERPTMREVVEMLAQAKQPNTF 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0348 994 Gene3D Ribonuclease Inhibitor 38 196 IPR032675 -
Dere05g0348 994 Gene3D Ribonuclease Inhibitor 510 634 IPR032675 -
Dere05g0348 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 790 994 - -
Dere05g0348 994 Pfam Leucine rich repeat 444 505 IPR001611 GO:0005515
Dere05g0348 994 Pfam Leucine Rich Repeat 301 323 IPR001611 GO:0005515
Dere05g0348 994 ProSiteProfiles Protein kinase domain profile. 711 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0348 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 680 789 - -
Dere05g0348 994 ProSiteProfiles Leucine-rich repeat profile. 301 324 IPR001611 GO:0005515
Dere05g0348 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 351 637 - -
Dere05g0348 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 151 238 - -
Dere05g0348 994 Pfam Protein kinase domain 713 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0348 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 40 150 - -
Dere05g0348 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 239 344 - -
Dere05g0348 994 Pfam Leucine rich repeat N-terminal domain 39 79 IPR013210 -
Dere05g0348 994 SMART LRR_typ_2 372 395 IPR003591 -
Dere05g0348 994 SMART LRR_typ_2 564 588 IPR003591 -
Dere05g0348 994 SMART LRR_typ_2 443 466 IPR003591 -
Dere05g0348 994 SMART LRR_typ_2 492 515 IPR003591 -
Dere05g0348 994 SMART LRR_typ_2 516 540 IPR003591 -
Dere05g0348 994 SMART LRR_typ_2 299 322 IPR003591 -
Dere05g0348 994 SMART LRR_typ_2 347 371 IPR003591 -
Dere05g0348 994 SMART LRR_typ_2 251 275 IPR003591 -
Dere05g0348 994 SMART LRR_typ_2 202 226 IPR003591 -
Dere05g0348 994 Gene3D Ribonuclease Inhibitor 397 509 IPR032675 -
Dere05g0348 994 Gene3D Ribonuclease Inhibitor 290 396 IPR032675 -
Dere05g0348 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Dere05g0348 994 Gene3D Phosphorylase Kinase; domain 1 678 789 - -
Dere05g0348 994 SMART serkin_6 711 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0348 994 Gene3D Transferase(Phosphotransferase) domain 1 790 993 - -
Dere05g0348 994 SUPERFAMILY L domain-like 314 651 - -
Dere05g0348 994 SUPERFAMILY Protein kinase-like (PK-like) 705 985 IPR011009 -
Dere05g0348 994 Gene3D Ribonuclease Inhibitor 197 289 IPR032675 -
Dere05g0348 994 SUPERFAMILY RNI-like 87 426 - -
Dere05g0348 994 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 205 987 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0348 Dere-ChrDere05 5007595 5011754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0348 25 987 Receptor kinase-like Gene Family AT5G65700 56.788 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere05g0348 Pkinase 2.7e-44 CL0016