Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0339 ATGGGTAAGCATTCTCCAGTTGTTTTCTTTTTTGTGCCATTCATTCTTGCTTCCATAGCAAGTTTCTTACAGTGTGATGCTACTGGTGAAGTTGAGGATAAGAAAACCTATATCATCTACATGGGATCACTTCCAAAGGGATCATCATACTCTCCAACCTCTCACCATTTGAGCATGCTTCAACTAGTTACTGATGAGGGTGACGCAACAAGTTCCTTGGTCAGAAGCTACAAGAGAAGCTTTAATGGGTTTGCAGCAAAGCTCACTGAAGAGCAAAGAGAAAAGATTGCGCAAATGGAAGGGGTGGTATCGGTTTTCCCGAGCACAACACTTCAAACTCATACAACAAGATCATGGGACTTCATGGGATTCGTTGACTCAGTCAAACGAAATGTGTCTGCTGAAAGTGAAGTTATAGTTGGACTTCTCGACACAGGAATCTGGCCAGAATCAGAGAGTTTCAGTGATGAAGGTTTTGGCCCCATTCCAAAAAAGTGGAAAGCTACATGTGCTGGAGGGAAGAACTTCACCTGCAACAACAAAATCATAGGAGCACGATTTTACATTCAAGAGTCAGCGAGAGATTACGATGGCCATGGCTCCCATACTGCCTCTATAGCAGCAGGAAACAAAGTTAATGGCGCAAGCTTTTATGGTTTAGCAGAAGGCACTGCAAGAGGAGGGGTTCCATCTGCAAGAATTGCTGCCTACAAAGTTTGCAATCGTTCAGAGTGCAGTAGTGCTGGTGTGTTGGCCGCTTTTGATGATGCCATTGCTGATGGAGTAGACATCATTTCTGTTTCATTGGGACCATTTTTTCCAGTAGATTTCTATGAAGACACTATAGCAGTTGGTTCCTTTCATGCTATGGCCAGTGGGATACTTACAGTGAATTCAGCAGGAAATTATGGGCCTCGTCCAATCTCAGTGTCCAGCGTAGCTCCATGGATGCTTACAGTAGCAGCTAGCACCACTGATCGTCAAATCATTGACAAGGTTGTTCTTGGGAATGGCATAACCTTGGTGGGAAATTCAGTCAACTCTTTTGAGTCACAAGGGAGAAAATTTCCTATAGCAAAGTGTGAAAAACTTGGTCTTGGCATTTGTCTTTGTTCATACGGTGTTGTGATCCGTGGAAACATTGTCTTATGCCCTGGTCCTGATGATGAATATGTTGCTTACGAAGCTGGTGCATCTGGTGCAATCATAGAGGATTATGGTGAAGGAAACGTGTCTCGTGTGAGTCTATATCCTTCACTGGTGGTATCTTCTCATGACTATAATCTTATTAAAACCTACACAAGATCAGCAAATCCAGAAGCTGAAATACTGAAGAGCGAGAGTATTAATGATGACACAGCACCTAGAGTAGCTGTGTTCTCTTCTCGTGGGCCAAACATGAAAGTTCCAGAAATTGTAAAACCAGATATTAGTGCTCCTGGAGTAAATATCCTGGCTGCATTTTCACCTATGGCTTCACCAACAGGTGTGGATGATCTAGACTCAAGGAGGGTGAAATACAGCATTCTCTTTGGTACCTCTATGGCATGCCCACATGTCTCTGGAACAGCTGCATATGTGAAAACATTTCATCCAGAATGGTCTCCAGCAATGATCAAATCTGCTATCATGACTACTGCTAAACCAATGAATAATACCGATGATCATCAGATTGGTGAGTTTGCTTATGGATCTGGGCATGTGAATCCCTTGCAGGCTATTGATCCTGGACTTGTTTATGACCTTTCTAAGGAAGATTACATAGAAATGCTTTGCCACTTGGGTTACAATACTACAACACTTAGACTGATTTCCGGAGATCAAAATGCTACATGCTCTAGATCTCCAGATAGATCCTTAGTCAGAAATACAAATTATCCTTCTGTAGCAATTGAAGTTCACTCCATGCAGCCTTTCAATGTCAAGATTAATAGAACAGTCACAAATGTTGGCTTTGAAAACTCAAACTACCAGGCAACTATATTCTCTGCACCAGGAATTAGCATTAAGGTGGAACCTGAGATTTTGTGTTTCAAGTCTTTGAATGAAAAACAATCTTTTGTTGTCACTATCGCTGGAGGAAACTTACCAGAAGTAGTGCTTTCCTCGTCACTAGTGTGGTCAGATGGCACCCATATTGTAAAGAGTCCAATTCTTGTAACGGTCATGAAATCCAATTAG 2181 0.4214 MGKHSPVVFFFVPFILASIASFLQCDATGEVEDKKTYIIYMGSLPKGSSYSPTSHHLSMLQLVTDEGDATSSLVRSYKRSFNGFAAKLTEEQREKIAQMEGVVSVFPSTTLQTHTTRSWDFMGFVDSVKRNVSAESEVIVGLLDTGIWPESESFSDEGFGPIPKKWKATCAGGKNFTCNNKIIGARFYIQESARDYDGHGSHTASIAAGNKVNGASFYGLAEGTARGGVPSARIAAYKVCNRSECSSAGVLAAFDDAIADGVDIISVSLGPFFPVDFYEDTIAVGSFHAMASGILTVNSAGNYGPRPISVSSVAPWMLTVAASTTDRQIIDKVVLGNGITLVGNSVNSFESQGRKFPIAKCEKLGLGICLCSYGVVIRGNIVLCPGPDDEYVAYEAGASGAIIEDYGEGNVSRVSLYPSLVVSSHDYNLIKTYTRSANPEAEILKSESINDDTAPRVAVFSSRGPNMKVPEIVKPDISAPGVNILAAFSPMASPTGVDDLDSRRVKYSILFGTSMACPHVSGTAAYVKTFHPEWSPAMIKSAIMTTAKPMNNTDDHQIGEFAYGSGHVNPLQAIDPGLVYDLSKEDYIEMLCHLGYNTTTLRLISGDQNATCSRSPDRSLVRNTNYPSVAIEVHSMQPFNVKINRTVTNVGFENSNYQATIFSAPGISIKVEPEILCFKSLNEKQSFVVTIAGGNLPEVVLSSSLVWSDGTHIVKSPILVTVMKSN 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0339 726 Pfam Fibronectin type-III domain 624 720 IPR041469 -
Dere05g0339 726 CDD Peptidases_S8_3 111 547 IPR034197 -
Dere05g0339 726 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Dere05g0339 726 ProSiteProfiles Serine proteases, subtilase domain profile. 118 574 - -
Dere05g0339 726 Gene3D - 326 450 - -
Dere05g0339 726 FunFam Subtilisin-like protease SBT1.5 137 336 - -
Dere05g0339 726 SUPERFAMILY Subtilisin-like 132 575 IPR036852 GO:0004252|GO:0006508
Dere05g0339 726 FunFam Subtilisin-like protease SBT5.3 26 114 - -
Dere05g0339 726 Gene3D - 591 723 - -
Dere05g0339 726 Pfam Subtilase family 136 564 IPR000209 GO:0006508|GO:0008236
Dere05g0339 726 PRINTS Subtilisin serine protease family (S8) signature 195 208 IPR015500 -
Dere05g0339 726 PRINTS Subtilisin serine protease family (S8) signature 511 527 IPR015500 -
Dere05g0339 726 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Dere05g0339 726 Pfam Peptidase inhibitor I9 36 114 IPR010259 -
Dere05g0339 726 ProSitePatterns Serine proteases, subtilase family, serine active site. 512 522 IPR023828 -
Dere05g0339 726 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 719 IPR045051 -
Dere05g0339 726 Gene3D Peptidase S8/S53 domain 138 587 IPR036852 GO:0004252|GO:0006508
Dere05g0339 726 CDD PA_subtilisin_like 333 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0339 Dere-ChrDere05 4904525 4907805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0339 33 723 Subtilisin-like Serine Gene Family AT5G59100 53.296 0.0 752