Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0323 ATGGCAGCCTCATGCTTGAAGCCACCTACGTTACCTAGCACTGAGGATGACTCTGTGGCACTGTTTTCAACCTCCAATTCTCCTCAAGACTCCATCTCTATCAGCGCTTCTTCTTCTTCTCTCTACCATTCTTCTTCACCCACAACTTTTCAGAATAATAAACTTTCTGTCACTAATCTCTCCTACACTATTCACCCTCGTAAATCCATACCCTTTTCATTTTTCTGTCACATGCCTCAGAAACCTAAGCCTCTACACATACTCAAGTCAGTCTCTTTTGTTGCCACAAGTTCTGAGATTGTTGCTCTTGTTGGTCCTAGTGGCACTGGGAAATCCACCCTTCTCCGAGTCATCGCTGGGCGAGTTAAAGACAAAGACTTTGATCCCAAGAGCATATCGATCAATGATCACCCAGTGACTAGTCCAGCACAATTGAGAAAGATCTGTGGTTTTGTGGCACAAGACGATAATTTGCTTCCTCTTTTAACTGTGAAAGAAACCCTGATGTTCAGTGCCAAATTTAGGCTAAAAGAAACGGCATCAAAAGATAGGGAAGCGAGGGTAGAGAGCTTGATGCAAGAGCTTGGACTGTTTCATGTTGCAGATAGCTATGTTGGGGATGAAGAGAATAGAGGGATTTCTGGGGGAGAGAGGAAAAGGGTATCCATAGGAGTTGATATGATTCATAATCCTCCAATTTTGGTCCTTGATGAACCAACCTCAGGCCTAGACAGTTCTTCAGCTCTGCAAGTGATAGAGCTTCTGTCATTGATGGTGAAGTCAAAGGAAAGGGCAGTGATTCTTTCAATCCACCAACCCAGCTATAGAATTTTGCAGTACATTTCTAGGTTCTTGATCCTCTCTCATGGCTCAGTTGTGTACAATGGTAGCCTGAGATCACTTGAGGAAACCATAACCAAGTTGGGATTTCAAGTTCCAGTACAACTCAATGCTTTAGAGTTTGCCATGGAAATTATACAGAGATTGGAAGATTCAAATTCCACATGTGATAGTGACACTTGCACCATACAAGACAAGGAAGAAGAAACTGGTAGGGTTGATCATAATTATGTAAGAGATGATAACAGCAAAAGGATTTGCAGTGTCTGCTATTTAAGCTTGATTGAGATATTGTTTCTCTGCTCAAGATTTTGGAAGGTCATTTACAGAACAAAGCAGCTATTCTTGGCCAGAACAATTCAGGCTTTAGTTGGTGGGTTTGGGCTTGGAAGTGTTTACATAAAGGTGAGGAAGGATGAAGGAGGAGTTGCAGAAAGACTGGGCCTTTTTGCATTCAGTCTGAGCTTTCTGCTCTCTTCCACAGTTGAAGCACTTCCAATATACCTACAAGAGAGGTGTGTTCTAATGAAAGAAGCCTCAAGAGGAGCCTACAGGATCTCCTCTTACATGGTGGCAAACACCCTCGTCTTTCTTCCTTTCTTGTTCGTAGTATCCATACTTTTCGCAGTCCCAGTGTACTGGCTCGTAGGACTCAACCCTTCCCTCGCTGCTTTCGCCTTCTTCGTCTTCGTGGTTTGGCTCATAGTGCTCATGGCAAGCTCGCTGGTTCTCTTCTTAAGTGCAGTGTCTCCTGACTTCATTTCTGGGAACTCATTGATCTGCACTGTGCTGGGGGCATTCTTCTTGTTCTCAGGCTACTTCATTCCGAAAGAGAGCATACCAAAGTACTGGATTTTCATGTACTATGTGTCACTGTATAGGTACCCTTTGGATGCGCTGCTCACGAATGAGTATTGGAATGTTAGGAACGAGTGCTTCTCTGAGGGCTCAGAAGATCAATATGAGTATTGCATGCTTACTGGGTTTGATGTGCTCAAGAGTAGAGGACTCGAGAAGGACACGAGGTGGATGAACGTGGGCATCATGCTTGGCTTCTTCGTGTTGTATCGTGTGCTTTGTTGGGTTATTCTCGCTAGAAAGGCTTCCAAGGCAACAATATAG 1962 0.4388 MAASCLKPPTLPSTEDDSVALFSTSNSPQDSISISASSSSLYHSSSPTTFQNNKLSVTNLSYTIHPRKSIPFSFFCHMPQKPKPLHILKSVSFVATSSEIVALVGPSGTGKSTLLRVIAGRVKDKDFDPKSISINDHPVTSPAQLRKICGFVAQDDNLLPLLTVKETLMFSAKFRLKETASKDREARVESLMQELGLFHVADSYVGDEENRGISGGERKRVSIGVDMIHNPPILVLDEPTSGLDSSSALQVIELLSLMVKSKERAVILSIHQPSYRILQYISRFLILSHGSVVYNGSLRSLEETITKLGFQVPVQLNALEFAMEIIQRLEDSNSTCDSDTCTIQDKEEETGRVDHNYVRDDNSKRICSVCYLSLIEILFLCSRFWKVIYRTKQLFLARTIQALVGGFGLGSVYIKVRKDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERCVLMKEASRGAYRISSYMVANTLVFLPFLFVVSILFAVPVYWLVGLNPSLAAFAFFVFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWIFMYYVSLYRYPLDALLTNEYWNVRNECFSEGSEDQYEYCMLTGFDVLKSRGLEKDTRWMNVGIMLGFFVLYRVLCWVILARKASKATI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0323 653 ProSitePatterns ABC transporters family signature. 213 227 IPR017871 GO:0005524|GO:0016887
Dere05g0323 653 MobiDBLite consensus disorder prediction 1 20 - -
Dere05g0323 653 Pfam ABC-2 type transporter 377 585 IPR013525 GO:0016020|GO:0140359
Dere05g0323 653 FunFam ABC transporter G family member 23 79 312 - -
Dere05g0323 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 305 IPR027417 -
Dere05g0323 653 Pfam ABC transporter 88 241 IPR003439 GO:0005524
Dere05g0323 653 Gene3D - 73 355 IPR027417 -
Dere05g0323 653 Pfam ABC-2 type transporter 271 336 IPR043926 GO:0140359
Dere05g0323 653 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 314 IPR003439 GO:0005524
Dere05g0323 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 37 638 - -
Dere05g0323 653 SMART AAA_5 97 299 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0323 Dere-ChrDere05 4628153 4630235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0323 68 297 Calmodulin-binding Proteins AT2G36910 27.083 1.39e-09 59.7