Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0314 ATGGAAGACGTGAAGGCCACCTACAGCATAGGGAAGGAGCTAGGGCGAGGGCGTCTTGGGGACACCCATCTATGCACGCACTTGGTGACAGGTGAGCAGTTTGCATGCAAAACCATAGCCAAGAGGATGCTGGCGAACGAGGATGATGTTGAGGATGTAAGAAGGGAGGTTCAAATCATGAACAACTTGGCTAGCCAGCCTCATATTGTAGGGCTCAAAGGTGCCTATGAGGATGAGCAATCGGTCCATCTCGACATGGAGCTGTGCGCCGGTGTCGAGCTCTTCAACCAGATCATCCACAAAGATCTTAAGCTTGAGAATTCTCATCCTTACTTAGCAAGTACATATTACATTGCACTAGATATGTTGAGGCGGAATTATGGCCCAGAAGTTGACACTTGGAGTGCTGGAGTCATGCCTTACATTCTTCTCTATGGTGTTCCTACATTTGAGTTCGAATTAGCACCTTACAATCATCCATGGATCAAGGAGGATGGAGAAGCACCAGATAAACCCCTTCACATTGATGTGCTAAAAACGCTCAAGCAATTCAGAGCAAGGCTATAA 567 0.4727 MEDVKATYSIGKELGRGRLGDTHLCTHLVTGEQFACKTIAKRMLANEDDVEDVRREVQIMNNLASQPHIVGLKGAYEDEQSVHLDMELCAGVELFNQIIHKDLKLENSHPYLASTYYIALDMLRRNYGPEVDTWSAGVMPYILLYGVPTFEFELAPYNHPWIKEDGEAPDKPLHIDVLKTLKQFRARL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0314 188 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 101 - -
Dere05g0314 188 ProSiteProfiles Protein kinase domain profile. 8 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0314 188 FunFam Calcium-dependent protein kinase 1 10 93 - -
Dere05g0314 188 Gene3D Transferase(Phosphotransferase) domain 1 110 151 - -
Dere05g0314 188 SMART serkin_6 8 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0314 188 Pfam Protein kinase domain 8 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0314 188 Gene3D Phosphorylase Kinase; domain 1 10 97 - -
Dere05g0314 188 SUPERFAMILY Protein kinase-like (PK-like) 7 151 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0314 Dere-ChrDere05 4530784 4534104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0314 1 186 EF-hand Containing Proteins AT5G12180 44.483 1.67e-66 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere05g0314 Pkinase 5.9e-16 CL0016