Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0300 ATGTCTACGTCCGACAGGGATGTTACAGACAAAGAACACGATAAAGATCAAGAAGGGAAGGGAGGATTCCTTGACAAGGTGAAGGATTTCATCCATGACGTCGGTGAAAAGATCGAAGAAACAATCGGGTTCGGGAAGCCAACAGCAGATGTTACTGCCATACACATTCCCTCAATCAATCTCGAGAAGGCAGATATCATCGTCGATGTGCTCATCAAGAACCCTAATCCAGTACCAATCCCTCTGATCGACATAAATTACTTGATCGAGAACGATGGGAGGAAGCTAGTTTCAGGGTTGATACCAGACGCAGGAACAATCCACGCACATGGCGAGGAGACTGTGAAGATTCCTGCAACATTGATTTACGACGACATAAAGAAGACGTACCAAGACATTAAACCTGGAAGCATCATACCGTATAGGGTTAAGGTTGATCTGATTGTGGATGTTCCTGTGTTCGGAAGGCTTACTCTACCTCTGGAGAAAACTGGAGAGATCCCAGTGCCGTATAAGCCTGGGGTTGAGCTTGAGAAGATTCATTTTGAAAGATTCTCTCTGGAAGAGACTGTGGCAGTTCTTCATCTGAAACTGGAGAATAAGAATGATTTTGATCTGGGACTCAATGCTCTGGATTATGAGATCTGGCTTGCTGAGGTTAGCATTGGAGGTGCTGAACTAGCCAAATCTGCGAAAATCGAGAAGGGTGGAATCAGTTCCATTGATATTCCATTCACGTTCAGGCCTAAGGACTTTGGGTCTGCACTGTGGGACATGATCAGAGGAAAGGGTACAGGGTACACCATTAAAGGGCATATTAATGTTGACACTCCCTTCGGAGCTATGAAACTGCCCATCAGCAAGGAAGGTGGCACCACCCGTATAAAGAAGAATAAAGAAGATGGTGACGATGATGAACCCGACGATCATGAGACTTCGATATGGCCTGGACGCCTGCCGCACCCTTTCCTTCCTTCAAAACGAGAGTGTTCCATCGATGAGGTGAAGGAAAAGCTTGAAGAAGCCGTGGCTCTGTCTCTAACTTCGATTTGCTCTGACTACGATTTCTGCCTGGTTTTGCATTTTTTATGTGTCAGTTTAGGTGAAATACATGTACTGTGTATCAATTTGCATTGGATTGTTGTCAACATGGTTCAGTACAAAGTTTTAGTTTGCCGAATTGGTTATGAAGACAAGGATTTTGATATATTAGCTTCAGAGAAAATGTACAAGAAGAAGAAACAAGTTGATAAACATGGACCTTCAAGTGGTCCTATGGATACGCAGGATCAGGAAATGGACATAAGGAAGACTATGAAAGATGTTGAAAATTTTGGGTACTCGCATATGTCATGGAAGGAGCGCAAGAAGATTGAAGATAAGAAGGTTGTTTCTCTTGGTGGGAAGAGCCCTAAGAAGCAGAGATTACCTTTAAGTGTGGCACGACCAATGATGAAAAAACAAAAGGAGAGAGAGCAGAAAATGCTCCAAGAGCGTTTGATTCTTGGACAATTTGGGGGAAAGCATGGCGGTAGCAGTAAAAGATCAATGGGGAAGCACAAACCTGAGGACAGGGGTCTGAAGTCCAGTGAAGGTCGTTTTAGAAATGGCGTTCTCAATGTGAGGCATTTGTTAAATAATTCGGCACAATCCAGAGATCATGCGACTGAAACCCATCTGTTCAGTAGTGGGAAAAAGAAAAATGGAAATAAGATGAAGCGAGGGTTCTTGATAGCCCCAACTCCCCCATTTTCTCGTTTTCCTTCAAAATCTGAAAGGGTTTTTGGTTCTTCTCCAACTATCAGCAATTCAAAGCTAAAATTGGCTAAAGATTTCTCTGGACGAAAAGCCATTGAATCACAAATTCCAAGGCCAATGGAACAGAGAAGAAGCTCTTCAGTGCCTCTGTTCTCAAATCTCTCCTCCCTTCTTCATCTTCTTCTTCTTCTTCTTGTTTTTGTTCTGGTCTGTCTCTCAGGATCTGCCAGAGCTTACAAGAACTACACAGTGGGAGATTCTCTGGGTTGGTTTGACAGTCTGGAGAAGTCTGATGTTGATTACCAGAAATGGGTCTCTGGAAAAGAATTCTCTCTTGGAGATTTTCTCATTTTCAACACAGACAACAACCACTCAGTTGTACAAACTTACAATTTCACCACATACAAACTGTGTGATTATATTGATGCACTAGACAACGACACAATCCAATGGTCGTCGGCGGATCCCTCGGCATCCGAGATTTGGCCGGTGACGGCGACAGTTCCATTGGTGAAGGAAGGGATGACATACTTCTTCTCAAGTCATTACGATGGCGAACAATGTATGAATGGACAACATTTTCAAATAAATGTGACTTATGGACAAGGGTTACCAAAAAGCTTAAAAGACCCTAGCGACGACGACTCTCTCTCTCCTGCACAGAGTCCAGTTTCCGGTGACGATGATTCAGTACCAGATACAATTGTTCCTTCTAGTTTTCTTAATCCTAAGAAAGAAGATGACGATGATAATAAAGTTAACGACAAAGTCAAGGATATATCTGGTTCTGTCTCGCTGTGTGGGTCAATTGTTTTATTAGGTCTTGCTTTTTTTGTTTCAATTTGA 2604 0.429 MSTSDRDVTDKEHDKDQEGKGGFLDKVKDFIHDVGEKIEETIGFGKPTADVTAIHIPSINLEKADIIVDVLIKNPNPVPIPLIDINYLIENDGRKLVSGLIPDAGTIHAHGEETVKIPATLIYDDIKKTYQDIKPGSIIPYRVKVDLIVDVPVFGRLTLPLEKTGEIPVPYKPGVELEKIHFERFSLEETVAVLHLKLENKNDFDLGLNALDYEIWLAEVSIGGAELAKSAKIEKGGISSIDIPFTFRPKDFGSALWDMIRGKGTGYTIKGHINVDTPFGAMKLPISKEGGTTRIKKNKEDGDDDEPDDHETSIWPGRLPHPFLPSKRECSIDEVKEKLEEAVALSLTSICSDYDFCLVLHFLCVSLGEIHVLCINLHWIVVNMVQYKVLVCRIGYEDKDFDILASEKMYKKKKQVDKHGPSSGPMDTQDQEMDIRKTMKDVENFGYSHMSWKERKKIEDKKVVSLGGKSPKKQRLPLSVARPMMKKQKEREQKMLQERLILGQFGGKHGGSSKRSMGKHKPEDRGLKSSEGRFRNGVLNVRHLLNNSAQSRDHATETHLFSSGKKKNGNKMKRGFLIAPTPPFSRFPSKSERVFGSSPTISNSKLKLAKDFSGRKAIESQIPRPMEQRRSSSVPLFSNLSSLLHLLLLLLVFVLVCLSGSARAYKNYTVGDSLGWFDSLEKSDVDYQKWVSGKEFSLGDFLIFNTDNNHSVVQTYNFTTYKLCDYIDALDNDTIQWSSADPSASEIWPVTATVPLVKEGMTYFFSSHYDGEQCMNGQHFQINVTYGQGLPKSLKDPSDDDSLSPAQSPVSGDDDSVPDTIVPSSFLNPKKEDDDDNKVNDKVKDISGSVSLCGSIVLLGLAFFVSI 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0300 867 CDD Phytocyanin 666 784 - -
Dere05g0300 867 MobiDBLite consensus disorder prediction 292 312 - -
Dere05g0300 867 MobiDBLite consensus disorder prediction 547 565 - -
Dere05g0300 867 PANTHER - 1 306 IPR045043 -
Dere05g0300 867 SMART why 49 166 IPR013990 GO:0009269
Dere05g0300 867 SMART why 175 292 IPR013990 GO:0009269
Dere05g0300 867 Pfam Domain of unknown function (DUF4602) 409 515 IPR027973 -
Dere05g0300 867 Pfam Plastocyanin-like domain 676 778 IPR003245 GO:0009055
Dere05g0300 867 MobiDBLite consensus disorder prediction 547 573 - -
Dere05g0300 867 Pfam Late embryogenesis abundant protein 70 165 IPR004864 -
Dere05g0300 867 Pfam Late embryogenesis abundant protein 196 290 IPR004864 -
Dere05g0300 867 SUPERFAMILY LEA14-like 170 299 - -
Dere05g0300 867 MobiDBLite consensus disorder prediction 1 21 - -
Dere05g0300 867 MobiDBLite consensus disorder prediction 791 839 - -
Dere05g0300 867 MobiDBLite consensus disorder prediction 516 531 - -
Dere05g0300 867 SUPERFAMILY LEA14-like 33 172 - -
Dere05g0300 867 FunFam Early nodulin-like protein 18 665 787 - -
Dere05g0300 867 SUPERFAMILY Cupredoxins 666 784 IPR008972 -
Dere05g0300 867 Gene3D - 172 295 - -
Dere05g0300 867 Gene3D - 21 171 - -
Dere05g0300 867 ProSiteProfiles Phytocyanin domain profile. 666 786 IPR003245 GO:0009055
Dere05g0300 867 FunFam Desiccation protectant protein Lea14 isogeny 21 171 - -
Dere05g0300 867 MobiDBLite consensus disorder prediction 800 814 - -
Dere05g0300 867 MobiDBLite consensus disorder prediction 505 531 - -
Dere05g0300 867 FunFam Late embryogenesis abundant protein Lea14-A 172 295 - -
Dere05g0300 867 Gene3D - 665 789 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0300 Dere-ChrDere05 4339856 4353969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0300 649 861 Phytocyanin Superfamily AT1G08500 56.279 1.11e-70 231