Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0295 ATGGCCCATCCAACGATCGACGAGGTGGCGACGACCACGGACTTCGACGGAGGAGAGACGCGCAACAGTCGTCTCCAGGTGTTCTTATCGTCGCTGTTTTCGACTCTTGGAGGCGTTTTCGGGAGTAATATTCAAGAGCAAGAGTCTGATATGGCTTCCAGAGTTTTGCCGGATGAACTGCATAAAGGTGAGAATAAGCAAAAGAACGTAGCAGCAGAAGGGCGGAATCGACGGGTACTCAAGGATATTGGTAATCTTGCTGATATTTCTAAGCGCATCACAAGGCATGAAGCAGCAGCAGAAAAGAATAAGAAACCAAATGCTGAATTGGTGACTGGAGTAGCAGCAACAACAAAGGTGTTAGAGGGGTTGAAGATCGGTCCCGCTGAAGAACCTGAAATTATTATCATTAGCTCTGATGATGATTTGGAGGAAGAAAAGGAGAAGAAGAAGAAGAAGAAGGAGCCTGCTAAAGCAAGAAACACAAAACAACATTCAGCTAAGAAGAACGTTAAGACCCTCAGTTCAATCCTCTCTGCTCGAAGCAAGGCTGCTTGTGGACATACTTCCAAGCCAAAGGATCAAGTAGTAAACGTTGATGCAACTGACGTTGACAATGAATTGGCAGCGGTTGAGTACATTGACGACATCTACAAGTTCTACAAACTCACAGAAGTTGAAAGCCGTGTGCATGATTACATGGGATCACAACCTGATATAAATGCTAAGATGAGATCGATCCTTGTGGACTGGTTGATAGAAGTACATCGTAAATTCGAACTCATGCCAGAAACTCTTCATCTGGCGATAAACATCGTCGACCGTTTCCTTTCTATGAAGTTTGTGTCCAGAAGGGAGCTTCAGCTGGTTGGCATCAGCTCCATGCACATAGCCTGCAAATATGAGGAGATCTGGGCTCCGGAGGTGAATGACTTTGTGTGCATATCAGACAATGCCTATAAAAGAGAACAGGTTTTGGTGATGGAGAAGACAATCTTGAGAAAGCTCGAATGGTATTTAACAGTACCAACACCATATGTCTTCCTTGTTCGGTATATCAAAGTCTCTTCTCCCTCTGATAAGGAGATGGAGAATATGGTGTATTTCCTAGCTGAACTTAGCCTGGTTCACTATGCCTCAGTTATACTGTATAGCCCTTCTGTGATTGCTGCTTCTGCTGTATATGCCGCGCGCTGTACACTTGATCGGAGCCCCATCTGGACAGAGACACTTAAGTACTACACAGGCTTTTCTGAAGACCAACTAATGGAATGTGCCAAGCTCATGGCGAGCTTTCACTCAGTAGCTGGTGAGAGTAAGCTGAGGGCAGTATACAAGAAGTTCAGTAGCCCAGATCGCTGTTCTGTTGCTCTTCTAGCTCCAGCCAAAAACTTGCTTGCAAAAAACTGTACATGA 1416 0.4506 MAHPTIDEVATTTDFDGGETRNSRLQVFLSSLFSTLGGVFGSNIQEQESDMASRVLPDELHKGENKQKNVAAEGRNRRVLKDIGNLADISKRITRHEAAAEKNKKPNAELVTGVAATTKVLEGLKIGPAEEPEIIIISSDDDLEEEKEKKKKKKEPAKARNTKQHSAKKNVKTLSSILSARSKAACGHTSKPKDQVVNVDATDVDNELAAVEYIDDIYKFYKLTEVESRVHDYMGSQPDINAKMRSILVDWLIEVHRKFELMPETLHLAINIVDRFLSMKFVSRRELQLVGISSMHIACKYEEIWAPEVNDFVCISDNAYKREQVLVMEKTILRKLEWYLTVPTPYVFLVRYIKVSSPSDKEMENMVYFLAELSLVHYASVILYSPSVIAASAVYAARCTLDRSPIWTETLKYYTGFSEDQLMECAKLMASFHSVAGESKLRAVYKKFSSPDRCSVALLAPAKNLLAKNCT 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0295 471 MobiDBLite consensus disorder prediction 137 170 - -
Dere05g0295 471 Pfam Cyclin, N-terminal domain 216 340 IPR006671 -
Dere05g0295 471 Pfam Cyclin, C-terminal domain 343 460 IPR004367 -
Dere05g0295 471 MobiDBLite consensus disorder prediction 153 167 - -
Dere05g0295 471 Gene3D - 230 341 - -
Dere05g0295 471 ProSitePatterns Cyclins signature. 245 276 IPR006671 -
Dere05g0295 471 SUPERFAMILY Cyclin-like 344 464 IPR036915 -
Dere05g0295 471 FunFam G2/mitotic-specific cyclin-1 331 457 - -
Dere05g0295 471 SMART cyclin_7 347 431 IPR013763 -
Dere05g0295 471 SMART cyclin_7 250 334 IPR013763 -
Dere05g0295 471 CDD CYCLIN_AtCycB-like_rpt1 193 338 - -
Dere05g0295 471 Gene3D - 216 457 - -
Dere05g0295 471 CDD CYCLIN_AtCycB-like_rpt2 343 461 - -
Dere05g0295 471 PANTHER CYCLINS 161 449 IPR039361 -
Dere05g0295 471 PIRSF Cyclin_A_B_D_E 41 471 IPR046965 GO:0016538|GO:0044772
Dere05g0295 471 SMART Cyclin_C_2 343 462 IPR004367 -
Dere05g0295 471 SUPERFAMILY Cyclin-like 205 340 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0295 Dere-ChrDere05 4307060 4309740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0295 51 470 Core Cell Cycle Gene Families AT2G26760 51.765 7.11e-146 420