Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0280 ATGGCAGATAGTGTCCAAGGAGAATCTTCATCAAATTCTTCAAATTCTGATAGTTCAACTTCAAAATGGAGATTTCACGTTTTCTTGAGTTTTATGGGACAAGACACTCGCAAAGGGTTTACAGATCACTTATCTGCTACTTTGTGTAGTGGAGGAATCATAACTTTTAGGGACGATAAAGGAATGGAGAAAGGAAAAGTTATATCACAACAACTCCTTAAAGCAATTGAGGATTCTCTCTCTGCAATTGTTGTTCTCTCCGAAAATTATGCTTCTTCTACATGGTGTTTGGATGAACTCCACAAGATTATGCAATCCAGAGATCAATTAAATCGACAAGTTTTTCCTATTTTCTATGGCGTAGATCCATCTGATGTAAGACATCAAACAGGAACTTTTGCTGAAGCTATAGCAAAACATGAAGAGAGATTCAAAGAGAGCCCAGAGAAGGTGCAAAAATGGAGACATGCTTTGACTGAAGTTGCCAACTTAGCTGGTTGGGATTCCAGGGGTCGTCATGAAACAGATCTTATTGAGGACATTGTTGGACAGATATGGACTAAAGTGTGTTCTAAACAACCATCCTGCAACAACAATGATAATCATAATCTTGTTGGAATTGATTCAAAGATAGCTGAAATGAATTCAGAATTTGGGATAGGGATGGACGATATCCGTTTTATAGGGATATGGGGTATGGGCGGTATTGGCAAGACAACTCTTGCTAGAGCTATCTATAATAAAAACTATGAGGAATTTGACATTTGTTGCTTTCTTGCCAATGTAAGAGAGGCTTCAGAAAGAAAAGACCAAGTTCATTTGCAAAGAAGATTTCTTTCACATCTCAATATACGTAGCATGGGGTGGCCGAAAGATGTAGTCACCAAAATTTTGGAAAGTTGTGGTCTTCATATGACAATTGGATTAAGTGTTCTCATTGAGAAAGCTTTGCTAATTGAAGAGCATTGTGTGGGTGGATTTTTTCTTTTGGAGATGCATGATTTACTAGAGGAATTGGGTAAGGATATTGTTTCAAAAGAATTTCCTGACGCTTGTAGACGCAGTAGATTGTGGAATTTAGAAGACATTGATAAAGTATTGAAAAATAATACGGGAACTGAAACAATACAAGCTATTGTTCTTCCTGGCTACATAGAGCGGAGAGTAGATTGCCATCCTGAAGCTTTTTCAAAAATGAGTAATCTTAGATTATTCATTGTATCACTATATGGTGATATGTTGAACTTTCCCTGTGGTCCCAAATGCCTTTCTAGTGCATTAAAAGTTTTTTACTGGCGATCATGTCCTCTAGAAGCTCTACCACTTGAGAATGGCATGCAGTGTTTGCAAAACTTGAAGCTTCTGGATCTGAGCTCTAGTAGAAGTTTGATTCAAACTCCAAATTTCTCTGGGACTCCAAATTTAGAGAGATTAATTCTTCAGTGGTGCACGTCCCTTGTTAAGGTTGATCCTTCGCTTGGAAAGCTGAATAAGCTTGTCGAATTGAATTTGGCTCACTGCATTAATCTTGAAACCCTTCCAACAAAGTTGGAAATGAATTCTTTAATAAAGTTAAAGCTTCGTGGGTGCCATAAAGTTACAGAGCTCCCAGAATTTGGGAAAGGTATGGAAAAACTATTAATTCTTGATCTGGAACATAGTGGTATTACAGGACTTCCACAATCACTTGGGTTCTTGAGTGGTCTTAGAGATTTGAAATTGAAAGGCTGCCAAAAACTTGAGTGCCGTCCCTCTACCTTTCGAAAATTGAAAAATCTCAAATTTCTTGACCTTCGTTGTTGCTTAAATATTTCCAATCTGCGAAATAATTGGAATGAAAATGAGGCCTCAGAAGAACTTTCTGCGTCTGCTTGGAGTTTTCATCTAACATCATTGATAGAGTTATACTTAACTGAGTGCCACATTCGTGATGGATTTTTTCCTAATAATGATGGCCATCATTCATCATTATTTGTATTAGATCTGAGCGGAAACAATTTTGAGAATCTACCCGATTGCATCTCAAATCTTTTGCAATTACGCTATCTTAATTTGGAATATTGCACAAGACTGAGGTCAATGCCAAAGCTTCCACCACGTTTAGTTCGACTAAATACATTGAATTGTCATTCAATGGAACCATTGTCAGATGGACAGTTGTGGAATCTCTTTTCTTCACTTGACCATGAGCCAGAATATCTTCCCCAAAGAGATTTTTTGGCAGCTGTTCCCGAAAAGGAAACTCCATCATGGTTTACAAATAAAGATTATCTTCTTTCAAATGATGGTGAATTTAAACATGTATTAATAACAGTGGACATCCCTAAATCTTGTCAGGCAAGTAAATGGTCAGGAATTGCTGTATGCCTCAATATAGAATCTAGCTGGTCCAATACTTCTTATATTTCCTGGAGTTCAAAAGCCCCTGGAGAAGATAATTTTATATGCAAAAGGTGGGCACATAATGTTATAAATCCACAACTTTGCCTGATGCTTTTGCATTTCAATGATCAGACATGTTGGCAGCATCTTAGTGGTGATAACAATCGCCTTCAAATAAAATTTAGGGTTACAACTAACTTGTATAGCGAAAGTTTAAGAATAATAGATTGTGGATGGCGTGTGTTATATAAAGAAGAGATGGAAGAGTGGTGCAACAACAATGATTTTCCCAAATTATGCGAAGCAGAGGTTGGCACTTCTGAGGTTTGGGTTCCTCCTACAATATGGGACACCTGTGTATCAAAGGAGAATTGCTGCCCAGACTTTCACTGA 2775 0.3755 MADSVQGESSSNSSNSDSSTSKWRFHVFLSFMGQDTRKGFTDHLSATLCSGGIITFRDDKGMEKGKVISQQLLKAIEDSLSAIVVLSENYASSTWCLDELHKIMQSRDQLNRQVFPIFYGVDPSDVRHQTGTFAEAIAKHEERFKESPEKVQKWRHALTEVANLAGWDSRGRHETDLIEDIVGQIWTKVCSKQPSCNNNDNHNLVGIDSKIAEMNSEFGIGMDDIRFIGIWGMGGIGKTTLARAIYNKNYEEFDICCFLANVREASERKDQVHLQRRFLSHLNIRSMGWPKDVVTKILESCGLHMTIGLSVLIEKALLIEEHCVGGFFLLEMHDLLEELGKDIVSKEFPDACRRSRLWNLEDIDKVLKNNTGTETIQAIVLPGYIERRVDCHPEAFSKMSNLRLFIVSLYGDMLNFPCGPKCLSSALKVFYWRSCPLEALPLENGMQCLQNLKLLDLSSSRSLIQTPNFSGTPNLERLILQWCTSLVKVDPSLGKLNKLVELNLAHCINLETLPTKLEMNSLIKLKLRGCHKVTELPEFGKGMEKLLILDLEHSGITGLPQSLGFLSGLRDLKLKGCQKLECRPSTFRKLKNLKFLDLRCCLNISNLRNNWNENEASEELSASAWSFHLTSLIELYLTECHIRDGFFPNNDGHHSSLFVLDLSGNNFENLPDCISNLLQLRYLNLEYCTRLRSMPKLPPRLVRLNTLNCHSMEPLSDGQLWNLFSSLDHEPEYLPQRDFLAAVPEKETPSWFTNKDYLLSNDGEFKHVLITVDIPKSCQASKWSGIAVCLNIESSWSNTSYISWSSKAPGEDNFICKRWAHNVINPQLCLMLLHFNDQTCWQHLSGDNNRLQIKFRVTTNLYSESLRIIDCGWRVLYKEEMEEWCNNNDFPKLCEAEVGTSEVWVPPTIWDTCVSKENCCPDFH 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0280 924 SMART till_3 24 164 IPR000157 GO:0007165
Dere05g0280 924 Gene3D - 18 191 IPR035897 -
Dere05g0280 924 MobiDBLite consensus disorder prediction 1 20 - -
Dere05g0280 924 Gene3D - 192 301 IPR027417 -
Dere05g0280 924 SUPERFAMILY L domain-like 332 725 - -
Dere05g0280 924 ProSiteProfiles TIR domain profile. 23 189 IPR000157 GO:0007165
Dere05g0280 924 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 191 - -
Dere05g0280 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 281 IPR027417 -
Dere05g0280 924 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 510 709 IPR044974 GO:0006952
Dere05g0280 924 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 167 IPR035897 -
Dere05g0280 924 Gene3D Ribonuclease Inhibitor 543 736 IPR032675 -
Dere05g0280 924 Gene3D Ribonuclease Inhibitor 345 542 IPR032675 -
Dere05g0280 924 ProSiteProfiles Leucine-rich repeat profile. 656 678 IPR001611 GO:0005515
Dere05g0280 924 PRINTS Disease resistance protein signature 227 242 - -
Dere05g0280 924 PRINTS Disease resistance protein signature 447 463 - -
Dere05g0280 924 Pfam NB-ARC domain 222 286 IPR002182 GO:0043531
Dere05g0280 924 Pfam TIR domain 25 199 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0280 Dere-ChrDere05 4037996 4042613 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0280 291 598 WRKY Transcription Factor Family AT4G12020 33.151 7.97e-35 142