Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0279 ATGCATACAAGCAAGAGGTTGAAAACTACGATTGCAGATAGTTTCCCAGGAGAATCTTCATCAAATTCTGATAGTTCAACTTCAAAATGGAGATTTCACGTTTTCTTGAGTTTTACGGGACAAGACACTCGCACAAATTTTACAGATCACTTATATGCTGCTTTGTGGAGTGGAGGAATCACAACTTTTAGGGACGATAAAGGAATGGAGAGAGGAGAAGTTATATCACTACAACTCCTTAAAGCAATTGAGGATTCTCTCTCTGCAATTGTTGTTCTATCCAAGAATTATGCTTCTTCTACATGGTGTTTGGATGAACTTCAAAAGATTATGGAATCCAAAGATGAATTAAATCGACAAGTTTTTCCTATTTTCTATGGCGTAGATCCATCTGACGTAAGACATCAAAGAGGAACTTTTGCTGAAGCTATAGCAAAACATGAAAAGAGATTCAAAGAGAGCCAAGAGAAGGTGCAAAGATGGAGACATGCTTTGACTGAAGTTGCCGACTTAGCTGGTTGGGACTCCAGGGGTTGTCGTGAAACAGATCTTATTAAGGACATTGTTGGACAGATATGGACCAAATTATGTTCTAAACTACCATCCTGCAACAACAATGATAATCTTGTTGGAATTGAATCAAAGATAGCTGAAATGAATTCAGAATTTGGGATAGGGATGGACGATATTCGTTTTATAGGGATATGGGGTATGGGCGGTATTGGCAAGACAACTATTGCTAGAGCTGTCTATGATAGAATCTATAGCCAATTTGACATTTATTGCTTTCTTGCCAATGTTAGAGAGGCTACACAAAGAGAAGACCAAGTTCATTTGCAGAGAAGATTTCTTTCACATCTCAATATAAGTAGCATGGGAACTGAAACAATACAAGCTATTGTTCTTCGTGGCTTCACAGAGCGGAGAGTATATTGCCATCCTGAAGCTTTTTCAAAAATGAGTAATCTTAGATTATTCGATGTGTCAGTATATGGTGGTATGTTGAACTTTCCCTGTGCTCTTAAATGCCTTTCTAGTGCATTAAAAGTTTTTCGCTGGGTACCATGTCCTCTAAAAGCTCTACCACTTGAGAATGGCATGCTGTGTTTGCAAAACTTGAAGCTTCTGAATCTGAGCTATAGTAAACGTTTGATTGAAACTCCAAATTTCACTGGGACTCCAAATTTAGAGAGATTAATTCTTCGGGATTGCACATCCCTTGTTGAGGTTCATCCTTCGCTTGGAAAGCTGAATAAGCTTGTTGAATTGAATTTGGCTTGCTGCAATAATCTTGAAATCCTTCCAAGGAAGTTGGAAATGAATTCTTTAACAAAGTTAGATCTTTGTGGGTGCTATAAAGTTACAAAGCTCCCAGAGTTTGGGAAAGGTATGGAAAAACTTTTAATTCTTGATCTGGAACTAACTGGTATTACAGAACTTCCAGAATCACTTGGGTTCTTGAGTGGACTTAGAGATTTGAAATTGAAAGACTGCAAAAAACTTGATTGCCTTCCCCCTACCTTTCGCAATTTGAAAAATCTCAAATTTCTTGACCTTCGTTGTTGCTTAAATACCTTCAAGCTGTCAAAGAATTGGAATGAAAATGTGGCCTCAGAAGAACTTTATGCGTCTGCTTGGAGTTTTCATCAACTCATGGGCTTTCATCTAACAGAGTGCGGCATTCGTGATGGATTTTTTCCTAATATTGTTAGCCATCTATCATCATTATTTGTATTAGATCTGAGCGAAAACAATTTTGAGAATCTACCCGATTGCATCTCAAATCTTTTGCAATTACGCTATCTTAAATTAGAATATTGCACAAGACTGAGGTCATTGCCAAAGCTTCCACCACGTTTAGTTCGACTAGATACATTGAATTGTCATTCATTGGAACCATTGTCAGATAGACAGTTGTGGAATCTCTTTTCTTCACTTGACCATGAGCCAGAATATCTTCCCCAAAGAGATTTTTTGACAACTATTTCTAGAGAGGAAACCCCATCATGGTTTACAAATAAAGATTATCTTCTTTCACATGAAGGTGAATTTGATAATGTATTAATAACAGTGGACATCCCTAAATCTTGTCAGGCAAGTAAATGGCCAAGAATTGCTGTTTGTGAGCCCTTTAGACAGTTTTGGAAGATACTCAAGGAGTTGAATTCTGCACGGATAAGGGGCACCAGTCTTTTCAATTCTGGAAGACATTCGATTTCCATCGATATAGTGTCATGGACATTTCTGACCTCTGTATTGCTCTCTGTTTTCTTATTCCAAAATAATATAATTTCACGTAGAGTGTGGTGCCAAGAATTTCGTGAGTTTACCATCCCTTCTTTTGCATAA 2349 0.3763 MHTSKRLKTTIADSFPGESSSNSDSSTSKWRFHVFLSFTGQDTRTNFTDHLYAALWSGGITTFRDDKGMERGEVISLQLLKAIEDSLSAIVVLSKNYASSTWCLDELQKIMESKDELNRQVFPIFYGVDPSDVRHQRGTFAEAIAKHEKRFKESQEKVQRWRHALTEVADLAGWDSRGCRETDLIKDIVGQIWTKLCSKLPSCNNNDNLVGIESKIAEMNSEFGIGMDDIRFIGIWGMGGIGKTTIARAVYDRIYSQFDIYCFLANVREATQREDQVHLQRRFLSHLNISSMGTETIQAIVLRGFTERRVYCHPEAFSKMSNLRLFDVSVYGGMLNFPCALKCLSSALKVFRWVPCPLKALPLENGMLCLQNLKLLNLSYSKRLIETPNFTGTPNLERLILRDCTSLVEVHPSLGKLNKLVELNLACCNNLEILPRKLEMNSLTKLDLCGCYKVTKLPEFGKGMEKLLILDLELTGITELPESLGFLSGLRDLKLKDCKKLDCLPPTFRNLKNLKFLDLRCCLNTFKLSKNWNENVASEELYASAWSFHQLMGFHLTECGIRDGFFPNIVSHLSSLFVLDLSENNFENLPDCISNLLQLRYLKLEYCTRLRSLPKLPPRLVRLDTLNCHSLEPLSDRQLWNLFSSLDHEPEYLPQRDFLTTISREETPSWFTNKDYLLSHEGEFDNVLITVDIPKSCQASKWPRIAVCEPFRQFWKILKELNSARIRGTSLFNSGRHSISIDIVSWTFLTSVLLSVFLFQNNIISRRVWCQEFREFTIPSFA 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0279 782 Pfam NB-ARC domain 227 290 IPR002182 GO:0043531
Dere05g0279 782 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 174 IPR035897 -
Dere05g0279 782 SMART till_3 31 171 IPR000157 GO:0007165
Dere05g0279 782 PRINTS Disease resistance protein signature 509 525 - -
Dere05g0279 782 PRINTS Disease resistance protein signature 232 247 - -
Dere05g0279 782 MobiDBLite consensus disorder prediction 8 26 - -
Dere05g0279 782 Pfam TIR domain 32 212 IPR000157 GO:0007165
Dere05g0279 782 Coils Coil 144 164 - -
Dere05g0279 782 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 317 527 IPR044974 GO:0006952
Dere05g0279 782 Gene3D Ribonuclease Inhibitor 542 648 IPR032675 -
Dere05g0279 782 Gene3D Ribonuclease Inhibitor 354 541 IPR032675 -
Dere05g0279 782 ProSiteProfiles TIR domain profile. 30 200 IPR000157 GO:0007165
Dere05g0279 782 SUPERFAMILY L domain-like 310 640 - -
Dere05g0279 782 MobiDBLite consensus disorder prediction 1 26 - -
Dere05g0279 782 Gene3D - 25 196 IPR035897 -
Dere05g0279 782 ProSiteProfiles Leucine-rich repeat profile. 575 597 IPR001611 GO:0005515
Dere05g0279 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 286 IPR027417 -
Dere05g0279 782 FunFam Disease resistance protein (TIR-NBS-LRR class) 28 198 - -
Dere05g0279 782 Gene3D - 197 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0279 Dere-ChrDere05 3968135 3973527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0279 283 602 WRKY Transcription Factor Family AT4G12020 27.557 2.87e-22 101