Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0276 ATGGAGCCGGACGAACGAAGGCAAGCCCACGAGGCCCCTCAGGCGGCTGCTCACAAAGCAGCAGCCTTAGGCTTAGTAATATCGTTACTCGCCGAAGAAATTCGTCCTGGGTTTCATCGAAATTCGTCATATATTCCTTTGCCCTCTCTCCGACGACCATTTCAAAGGGATAATGAACAAGGTAATCAGAGCTTAGATATCACCGACCCCAAGAATTTCAGCCACGACATGGAAGGTTATCCAAAATTACTAAATAGCTTGAACCAGAAAAGCATGGAAGCAAAGAGAGTGGTGGTGATCCTGGATGCATACGATGAAGTCAATTCAAGAATCTTTCGTTGGGCCATAAATGGATTATCACTCAAGCCAGGAGATAAGCTCACCCTTGTTGCAGTTCTGCATCAGTTTTATACTCCTATGGGGTACCTAAGTAAATTGGACGACGCATCATTTGTTGGAGCAAACAAAAGAAGCATAGAGATAGAAGCTGAAAGGAGGATGGAAGGATACCAAAACGATGAGGAGCTTATTCAGATTTCCAAACTGTATGAATCAGAGGAGGTTGAATTCAGGATAGAGCTAGTCATGGGAACTTCACTTAAGGAGGTTACTTTAAACAAAGCAAAAGAACTAAATGCAACTTGGGTGATACTGGACAGGCATATGAAGAGAGATGGAAAGTATTTCCTGCAAGAGCTTTCTTGTGGTGTATCAAGATTGAAGCGTCAGAATAGGATTGAACATTTGAGAAAGCCACCAGTTCTCCCCACTGTGATATGTTTCAGTCATGAAACAGACGGTGGCAGTGCTCCAGGATGTCCTGATGATGAGGATATCAGCCTGGAAGGTAACCCCAAGGGTGAAAGAAAACAAAAACAGCCAGACAATGAACAAGAAAAGATGCCAAGCAACCCTGATAAGGAGGATGACTTTACACCTACTATTGCCTATCAACCAAGTGCGACAAAACCTGATGAACACAGAACAGGTAATGAAGAGGAATGTAACAGCATTTATGTTGACGGGAGGGACTGCAGGCGTGCAACAAACAGTGATCAATTGATAGATCAAACAAAAGCTGAGCCATTGATCCATGATCAAGAAGATGTTAAAGATGAAATGCAAGAGAAAAACTTCTTCAGAAATACAAAATGCTCTATCTGCTCAGTCTGCAAAAGTAGACGGCCATATAGTGGATGGAACATGGACTTCACATATAGAGAACTTCAAGTTGCCACAGATGGATTTTCAACTGAGAACTCTCTCTCTGAAGGAGGATATGGATCTACTTTCAAAGGTCAGCTTGAGTGTGAGCAGAAAATAGTAGTTAAGCAGCATCATCTAACAGATTCTCAAGTAGAGAAACAAATGATGTCTCAAGTGCAATTGATCCTCAAAGCTAGACACAAGAATGTGGCCATGCTGTTGGGTTCATCTACAGAAGAAAGTCAACTGCTGGTGGTATATGAGTATGCCTGCAATGGTTCACTTGACAAATATCTATCAAAGGAAAGTTGCAGGCCATTAAGCTGGGGAGAAAGGGTGAAAATAGCTGTAGGTGTCTCCAGGGGTCTGAAGTACTTACATGAGAATAACATAATTCATGGAAGTATACAACCAAGTAACATTCTTCTAAACCATGAATTTGAACCAATGCTTGGAGATTTCAGCTTTGGGAGAACAAAACGTGCACTGAAGAAGTCCCACAAAGATAAAAGCTTTGGGAATTCCGGATACAAAGCACCAGAGTATCTGGAGAGTGGGAAACTATCAACTAAGACTGATGTATACTCCTTTGGAGTGATTCTTTTGGAGCTTATCACTGGTCAGAGAGCTACAGACAAAATACCAGGAGAAAAAAGCCTTGTTGGATGGGCAAAGCCTCTTCTTGGAGGAAAGAAGTATGCACAATTAGTGGATCCCAAAATTGTAAGCTCGTATGAAGATGAACAGCTTCATTGGTTGATCCAAGTAACAGAAAAATGTCTCAAAAAGAATCCAAAGGAACGATTAAGCATGAATATGGTAGTCTCTGCATTACAAGGTATAACAGAGAGCGAAGAGGGTTGTGTCATGGTAGACTTTTCTCCGGCAATTTCAAATTCAACATGCAGCATATCAGACATTGCTTGTTCACAAGGTAAAGAGGAAAAACAAGAGACTCAGGAAAGTAAGAAGTACACAATTTACAGTAGAAGTAACAAGAAAATTATAGGATTAGATAGCTTGAGGACAAAGGGGGGTCTTAATGATAAGTTTATGATAGGTCAAACAAAATCTGATCAGCTGACTGAGGAAGAGCAGATCAAGAGCTGCCACTATGGAGAAGAGAGGATTTCAGGGCCAACAAATGATAATAATGACATGATATGTCATAGAAAAGCTGATCATTTAAGCAAATGGGTGGAGAACAATTTAGGACAGATGAAAAGCTTCAACCATATGATGGGTTTGACAAAAGTTGATACACCGAACCTGGATCAAGAAGGACAGAGCAGTTTCATCAGAGCTGAGTCCACTGTTGGTCAAATGACAGATGATACAAAAGGAGATATACTGAATGGGCACCAGGGTGAAGTAATTTTGGATAGTTCAAAATCATATGTATGTTCCATTTGCAAAAGTAGACGCTTAAATATTGGATGTCAAAAGGACTTCACTTACAATGAACTGAAAGCTGCTACAGATGGATTTTCAATTCAGAACTCTCTATCTCAAGTTGGAAATGGACCTGCTTTCAGAGGCATTCTAGATCGTAAGCTGAAAATATTTGTTAAGATACATCAAATTAATAGCAATCAGGAAGAGGAGATATTTAAGTCAGAAGTACAGTTGCTAAATAAAGCTATGCATAAAAATGTGGTCATGCTGCTGGGTTCATGCGCTGACAAAAATCAACAGATGATCGTGTATGAGTTTGCTTGCAATGGTTCACTTGACCAGTACCTATCAGGAGGAAGTTGCCGGCCATTGACTTGGAGAGAAAGGGTGAAAGTAGCAATTGGTGTCTCCAGAGGTCTGAAATACCTTCATGAGATTAACATAATTCATGGAAGTATAAAACCAAGCAACATTCTTCTAACCCATGAATTCGAACCGCTGGCTAAGCCTCTTCTTGGAGGGAAGAAGTACCCACAGCTGCTGGATACTAAAATCAGCAGCTCCTACAAAGAAGACCAACTTCAATGGTTGATCGAAGTAACTGAACAATGTCTCAGAAAGAATCCTAAGGAAAGATCAAGCATGAATATGGTTGTCTCTGCATTACAAGACATGGAAGATATTGATGATTTACGTCCAATTGAAGACTCTTCTATGGAAAAATCATATTTACCAGAGTGTGTACCTGGCATGACTTGTTCACAAGGTCAAACTGATCAGCTGAGTCAGGAACAAAAACAGATTGAAAGCATCCCCTATGTGGAGGAGAGCTTAAGACCAATGATTGAAAATAATGACATAACAGGTAATAGCAAAGCTGATCAGGTAAGCCAGGATCAAGAAGAAACAGAGGGCAGCTTCAAAATAGAAGAGAGGGGCAAAAGACTCACAACTACGAGTAGCCAAATTATAGGTGAAAATGATGATAAAAAACAAATGCATTGCAGCTTTCTTGCAGATTCATTCGATGGTTGTAAAGGTAAAGTCATTTTGGCAGATTCAAAATCTTCTGTATGCTCTATCTGCAAAAGTAAACGTCCAAATATTGGATCGCAAAAGGACTTCACTTACAATGAACTCCAAGCTGCTACTGATGGATTTTCAATCAAGAACTCTCTATGCGATGGCGTATATGGACCTGCATTCAGAGGCCAGCTAAAGTGTAATCTGAAAATAGTTGTTAAGCAACTTCAAATGACAAGCTCCCAGGAAGAGAATATATTCAAGTCAGAAGTTCAGCTCCTCACCAGAGCAAGACATGAAAATGTGGTCATGTTGTTGGGTTCATGCATGGAAGAAACTAAATTGGTGATTGTATATGAGAATGCATGCAATGGTTCACTTGACCAGTACTTATCAGGGGTAGGTTGCAGTTCACTGACATGGAGAGAAAGGGTGAAAATTGCAGTAGGTATCTCCAGAGGTCTAAAGTATCTCCATGAGAATAACATAATTCATGGAAGTATTAAACCAAGTAACATTCTTCTAACCCACGAGTTCAAATCACTGGTTGGAGATTTTGGGTTTGGAAATTCAAAAAATGAACTGAAGAATTGGCACAAGAATAAAAATGTAGAAGATTCTGGCTACATGGCTCCAGAGTTTTTGGAGAGTGGAAAGTTATCCAGTCCTTCCCTGGACATTTCCCCTCTACATCTAAGTTATGCAAAGCCACTTCTTAGAGGAAGGAAGTATCCACAATTGGTGGATCCAAAAATCAGCAGCTCCTGCGATGATCAAGATCTTTTTTCGTTGGTCCAAGTAATCGAAAAGTGTCTAAGAAAGAATCCCAAGGAAAGATTAACGATGAATATGGTTATCTCAGCATTGCCATGCATAGTTGATAACATTGTAACTGATGATTCCTTTGCGGAAATGTCATACTTACGCAGTTTGTCTGATGTACCTAGCTCACAAGATAACGAAGCAGCAGAAGATGACTTAAGCAGAGATGTTAGTCAAGCAAGCAAGAACTGTGAAACATGCAGCGGAAGTAATGAGGAAAGAAAATTTTGTCAAGAGGACCCAAAACACATAACTTTTGGTGAAAGTAATGAGGAAACACAAGAATCAGAGTTAATCACCAAGGTAGATCAGGAAACTGTGAGTGATGAAACTTGTTCAACAAACCATGACCATGGAATTGCATACTTAGAAAAGGAAAATAGCATATTTAAGGAAGTCTTGCCCAAGAAGATTTCGTACATTTGA 4872 0.4009 MEPDERRQAHEAPQAAAHKAAALGLVISLLAEEIRPGFHRNSSYIPLPSLRRPFQRDNEQGNQSLDITDPKNFSHDMEGYPKLLNSLNQKSMEAKRVVVILDAYDEVNSRIFRWAINGLSLKPGDKLTLVAVLHQFYTPMGYLSKLDDASFVGANKRSIEIEAERRMEGYQNDEELIQISKLYESEEVEFRIELVMGTSLKEVTLNKAKELNATWVILDRHMKRDGKYFLQELSCGVSRLKRQNRIEHLRKPPVLPTVICFSHETDGGSAPGCPDDEDISLEGNPKGERKQKQPDNEQEKMPSNPDKEDDFTPTIAYQPSATKPDEHRTGNEEECNSIYVDGRDCRRATNSDQLIDQTKAEPLIHDQEDVKDEMQEKNFFRNTKCSICSVCKSRRPYSGWNMDFTYRELQVATDGFSTENSLSEGGYGSTFKGQLECEQKIVVKQHHLTDSQVEKQMMSQVQLILKARHKNVAMLLGSSTEESQLLVVYEYACNGSLDKYLSKESCRPLSWGERVKIAVGVSRGLKYLHENNIIHGSIQPSNILLNHEFEPMLGDFSFGRTKRALKKSHKDKSFGNSGYKAPEYLESGKLSTKTDVYSFGVILLELITGQRATDKIPGEKSLVGWAKPLLGGKKYAQLVDPKIVSSYEDEQLHWLIQVTEKCLKKNPKERLSMNMVVSALQGITESEEGCVMVDFSPAISNSTCSISDIACSQGKEEKQETQESKKYTIYSRSNKKIIGLDSLRTKGGLNDKFMIGQTKSDQLTEEEQIKSCHYGEERISGPTNDNNDMICHRKADHLSKWVENNLGQMKSFNHMMGLTKVDTPNLDQEGQSSFIRAESTVGQMTDDTKGDILNGHQGEVILDSSKSYVCSICKSRRLNIGCQKDFTYNELKAATDGFSIQNSLSQVGNGPAFRGILDRKLKIFVKIHQINSNQEEEIFKSEVQLLNKAMHKNVVMLLGSCADKNQQMIVYEFACNGSLDQYLSGGSCRPLTWRERVKVAIGVSRGLKYLHEINIIHGSIKPSNILLTHEFEPLAKPLLGGKKYPQLLDTKISSSYKEDQLQWLIEVTEQCLRKNPKERSSMNMVVSALQDMEDIDDLRPIEDSSMEKSYLPECVPGMTCSQGQTDQLSQEQKQIESIPYVEESLRPMIENNDITGNSKADQVSQDQEETEGSFKIEERGKRLTTTSSQIIGENDDKKQMHCSFLADSFDGCKGKVILADSKSSVCSICKSKRPNIGSQKDFTYNELQAATDGFSIKNSLCDGVYGPAFRGQLKCNLKIVVKQLQMTSSQEENIFKSEVQLLTRARHENVVMLLGSCMEETKLVIVYENACNGSLDQYLSGVGCSSLTWRERVKIAVGISRGLKYLHENNIIHGSIKPSNILLTHEFKSLVGDFGFGNSKNELKNWHKNKNVEDSGYMAPEFLESGKLSSPSLDISPLHLSYAKPLLRGRKYPQLVDPKISSSCDDQDLFSLVQVIEKCLRKNPKERLTMNMVISALPCIVDNIVTDDSFAEMSYLRSLSDVPSSQDNEAAEDDLSRDVSQASKNCETCSGSNEERKFCQEDPKHITFGESNEETQESELITKVDQETVSDETCSTNHDHGIAYLEKENSIFKEVLPKKISYI 1623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0276 1623 MobiDBLite consensus disorder prediction 1152 1174 - -
Dere05g0276 1623 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 492 691 - -
Dere05g0276 1623 Gene3D Phosphorylase Kinase; domain 1 379 491 - -
Dere05g0276 1623 MobiDBLite consensus disorder prediction 49 72 - -
Dere05g0276 1623 Gene3D Phosphorylase Kinase; domain 1 1226 1329 - -
Dere05g0276 1623 SUPERFAMILY Protein kinase-like (PK-like) 397 704 IPR011009 -
Dere05g0276 1623 MobiDBLite consensus disorder prediction 266 332 - -
Dere05g0276 1623 FunFam Proline-rich receptor-like protein kinase PERK8 860 973 - -
Dere05g0276 1623 PANTHER OS01G0253100 PROTEIN 361 688 - -
Dere05g0276 1623 FunFam Proline-rich receptor-like protein kinase PERK8 1216 1329 - -
Dere05g0276 1623 SUPERFAMILY Protein kinase-like (PK-like) 887 1095 IPR011009 -
Dere05g0276 1623 Pfam Protein tyrosine and serine/threonine kinase 1256 1432 IPR001245 GO:0004672|GO:0006468
Dere05g0276 1623 Pfam Protein tyrosine and serine/threonine kinase 910 1030 IPR001245 GO:0004672|GO:0006468
Dere05g0276 1623 Pfam Protein tyrosine and serine/threonine kinase 418 680 IPR001245 GO:0004672|GO:0006468
Dere05g0276 1623 MobiDBLite consensus disorder prediction 55 70 - -
Dere05g0276 1623 ProSiteProfiles Protein kinase domain profile. 898 1210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0276 1623 ProSiteProfiles Protein kinase domain profile. 1254 1500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0276 1623 ProSiteProfiles Protein kinase domain profile. 416 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0276 1623 SUPERFAMILY Protein kinase-like (PK-like) 1237 1501 IPR011009 -
Dere05g0276 1623 MobiDBLite consensus disorder prediction 279 307 - -
Dere05g0276 1623 FunFam Proline-rich receptor-like protein kinase PERK8 378 491 - -
Dere05g0276 1623 Gene3D Transferase(Phosphotransferase) domain 1 975 1034 - -
Dere05g0276 1623 Gene3D Phosphorylase Kinase; domain 1 874 973 - -
Dere05g0276 1623 Gene3D HUPs 84 239 IPR014729 -
Dere05g0276 1623 Gene3D Transferase(Phosphotransferase) domain 1 1331 1513 - -
Dere05g0276 1623 Gene3D Transferase(Phosphotransferase) domain 1 493 696 - -
Dere05g0276 1623 Gene3D Transferase(Phosphotransferase) domain 1 1035 1106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0276 Dere-ChrDere05 3910171 3928389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0276 404 688 Trihelix Transcription Factor Family AT5G38560 37.838 1.16e-57 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dere05g0276 PK_Tyr_Ser-Thr 4.5e-40 CL0016