Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0266 ATGGCTGCGGCGCCCATTGGACAAATCGACTTCACTGAATACCCTAAAGGAATCAAAACCACTGATCGCTATGAGAAGTTGGAGCAAGTTGGCGAGGGGAGTTACGGGTCATTCCCCATAACTGCTATACGTGAAATCAAAATTCTAAGTAAATTAGATCATCCAAACGTGATCAAGCTGAAAGAAACTGTGCAATCACCAGGGCCGGAGAGAGATAAGCCAGATGGTAACAAGTATAAAGGTGGCATCTATATGGTCTTTGAATACATGGAACATGATTTGGCAGGTCTTATTGAGCGACCTGGGGTGGTTTTGACACCTGCCCAAATTAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCACTATTGTCATGTAAATAAAGTACTTCATCGTGACATCAAAGCCAGTAATCTTCTGATGAACAATGAAGGTATCCTGAAGCTTGCAGATTTTGGACTGGCAAAGTCAATTGAGAGAATCCGCAGCAATTCGAAGCTTACAAATCCAGTCATTACATTATGGTACAGACCCCCAGAGTTGCTGCTAGGGGCAACAAATTATGGGCCAGCTATTGATATTTGGTCTGCTGGGTGCATTTTGGCTGAGCTTCTTAATGGCAGGTGTATTTTTCGTGGAAAAACTGAGGCAGATACTCTAAATCAAATTTTTGAGCTGTGTGGAGCACCAGATGACTCAAGCTGGCCTGGGGTTTCTGATCTGCCTTTATATACTACAATGAAACCAACAGGACCAATGCGAAGACGTCTTGGGGAAGCTTGCAGTCATTTTGAAAAACATGCTTTGGAATTGTTGGAGAGGATGTTGACTCTTAATCCTGCTCAGAGAATTAGTGCTAAGGATGCGCTTGTTGCTGACTATTTCTGGACTGATCCATTACCCAGTGATCCCAAGAGTTTACCCAAGTATGAGGCATCACATTTCTATGAGGCAAAAAAAAGGCGCCAGCAACTAAAGATAGTTGGAGAAAGTCAGAAGATGATGCCTCCAAAGAAGTGTTATGGCTCTCAACTAGGATCTAGCAGCCATCAGCATCATAGCAGTGGGCCATATCCTCCTCCTTCTCAAGAGAGGCCTAGTGCAGGTTGTCATGGTGGAGGTGGCAGCGGTAGTGGCTATGGACGTGGTGCTCCAACTCAACTTGTAGGGTATGGATCAACTCATGGGTCTAGACATGTCCCTAGCTTTGGTTCTCATGGTGGAGTTGGCAGTGACAGTGGCTATGGTGGAGCTCCATATTATCCTCAAGGGTATGGTTCTCATAGTGCTGGATGTCATGGTGGTGGCAGTGGCAGCGGCTATGGAGCTCCAAATCAACCTCAAGGGTTTGGATCAACTCATGGGCCTAGACATGTGCCTGGCTTTGGTTCAGGCGGAGTGAGCAGTGATAGTGGCTGTGGAGATGGAGCTCAAAATTATGTTCAAGGGTATGGAACATCTCAAGGATCTAGAGGTGTGCCTACCTTTGGTTTTCATGGTGGAGGTGGAGTTGGTAGTGGCAGCGGCTATGGAGGTGGAGCTCCTAATCAACCTAAGGGGCATGGATCAACCCATGGGTATAGAGATGTGCCTAGCTTTGGTTCTGGTGGAATTAGCAGTGATGGGGGCCGTGGAGGTGGAGCTCCAAATTATCTTCAAGGGTATGGAACTTTTCAAAGATCTCGAGATGTGCCTACCTTTGGTTTTCATGGTGGAGTAAGCAGTGACAGCAGCTATAGAAGTGGAGCTCCATATTATCCTCAAGGGTTTGGATTATCTCGTAGGTCTCAAGCTGTGCCTAGCTTTGATTCTCATGGTGGAGGTGTTGGTAGTGGCAGCGGCAGTGGAGGTGGAACTTCAAATCATCCTCAAGGGTATGGACCAATTCACGGGTCTGGTGTTGTGCCTAGCTATGGTTGTTATGGTGGAGTTGATAGTGGCAGCGGCCATGGAGGTGGAGCTCCAACTTATCCTCCAGGGTTTGTACCATCACTCAGGTCTAGAAACGTGCCTACCTTGGGTTTTCATGCTCGAGGTGGAGTTAGTAGTAGTAGCGGCTATGGAGGTCGAGATCCAAATAATCCTCCAGGGTTTGGGCCATCTCATGGGTCTGGAGATGTGCCTAGCTCCGGTTCTCATGGTGGAGGAGGCAGTGGCAGTGGCTATGGAGGTGGAGATCCATAA 2184 0.4734 MAAAPIGQIDFTEYPKGIKTTDRYEKLEQVGEGSYGSFPITAIREIKILSKLDHPNVIKLKETVQSPGPERDKPDGNKYKGGIYMVFEYMEHDLAGLIERPGVVLTPAQIKCYMRQLLTGLHYCHVNKVLHRDIKASNLLMNNEGILKLADFGLAKSIERIRSNSKLTNPVITLWYRPPELLLGATNYGPAIDIWSAGCILAELLNGRCIFRGKTEADTLNQIFELCGAPDDSSWPGVSDLPLYTTMKPTGPMRRRLGEACSHFEKHALELLERMLTLNPAQRISAKDALVADYFWTDPLPSDPKSLPKYEASHFYEAKKRRQQLKIVGESQKMMPPKKCYGSQLGSSSHQHHSSGPYPPPSQERPSAGCHGGGGSGSGYGRGAPTQLVGYGSTHGSRHVPSFGSHGGVGSDSGYGGAPYYPQGYGSHSAGCHGGGSGSGYGAPNQPQGFGSTHGPRHVPGFGSGGVSSDSGCGDGAQNYVQGYGTSQGSRGVPTFGFHGGGGVGSGSGYGGGAPNQPKGHGSTHGYRDVPSFGSGGISSDGGRGGGAPNYLQGYGTFQRSRDVPTFGFHGGVSSDSSYRSGAPYYPQGFGLSRRSQAVPSFDSHGGGVGSGSGSGGGTSNHPQGYGPIHGSGVVPSYGCYGGVDSGSGHGGGAPTYPPGFVPSLRSRNVPTLGFHARGGVSSSSGYGGRDPNNPPGFGPSHGSGDVPSSGSHGGGGSGSGYGGGDP 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0266 727 MobiDBLite consensus disorder prediction 507 526 - -
Dere05g0266 727 PANTHER CELL DIVISION PROTEIN KINASE 27 301 - -
Dere05g0266 727 SMART serkin_6 24 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0266 727 MobiDBLite consensus disorder prediction 437 474 - -
Dere05g0266 727 Gene3D Transferase(Phosphotransferase) domain 1 92 333 - -
Dere05g0266 727 MobiDBLite consensus disorder prediction 671 727 - -
Dere05g0266 727 MobiDBLite consensus disorder prediction 342 358 - -
Dere05g0266 727 Gene3D Phosphorylase Kinase; domain 1 37 91 - -
Dere05g0266 727 ProSiteProfiles Protein kinase domain profile. 1 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0266 727 FunFam Cyclin-dependent kinase C-2 92 335 - -
Dere05g0266 727 Pfam Protein kinase domain 40 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0266 727 MobiDBLite consensus disorder prediction 327 408 - -
Dere05g0266 727 CDD STKc_CDK9_like 24 295 - -
Dere05g0266 727 MobiDBLite consensus disorder prediction 596 630 - -
Dere05g0266 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Dere05g0266 727 SUPERFAMILY Protein kinase-like (PK-like) 19 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0266 Dere-ChrDere05 3755119 3760988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0266 1 443 Core Cell Cycle Gene Families AT5G10270 53.292 6.21e-154 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dere05g0266 Pkinase 1.6e-58 CL0016