Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0264 ATGCAGTTATTCATTCTCAGTAGATTCATTATTCAGAAATCATTCAAAATGAGCCAGCCTAAAATTAAGCGCCGTATAGGTAAATATGAGGTGGGGAGGACCATTGGTGAGGGAACATTTGCAAAAGTGAAATTTGCAAGGAACTCAGAAACTGGGGAGCATGTGGCTATCAAAATTCTGGACAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAACAGATCAGGCGGGAAATAGCTACAATGAAGTTAATCAAGCATCCTAATGTTGTTCGATTATATGAGGTCATGGGAAGCAGGACAAAAATATATATAGTTTTGGAGTTTGTGACTGGGGGAGAGCTCTTTGACAAAATTGTAAACAATGGACGGATGAGTGAAAATGAAGCACGTAGATATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTCAAGCCAGAAAATTTGCTACTAGATGCATATGGCAATCTTAAAGTTTCTGATTTTGGGTTGAGTGCTCTATCACAACAAGTTAAGGATGATGGACTGCTCCATACTACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTGATGACAGAGGCTATGATGGGGCAACTGCAGACTTGTGGTCGTGTGGAGTGATTCTCTTTGTATTGCTTGCAGGTTACTTGCCTTTCGATGACCCTAATCTTATGAAGCTGTATAAAAAAATCTCTGCTGCTGAATTTACTTGGCCCCCATGGCTCTCTTTCAGTGCCAGGAAGTTGATAACTCGAATTTTGGATCCCAACCCCATGACTCGTATCACTATATCTGAGATCTTGGAAGATGAATGGTTCAAGAAAGATTATAAGCCTCCAGTCTTTGAGGAGATCTGGGAAACCAACCTTGATGATGTTGAAGCTGTATTTAAAGATTCTGAAGAACACCTTGTGACAGAGAAGAAGGAAGAACAGCCAACTGCCATTAATGCATTTGAATTAATTTCCATGTCCAAAGGGCTAAACCTTGAAAACTTGTTTGATGTAGAGCAGGGGTTTAAGAGGGAAACAAGGTTCACATCAAGATGCCCTGCCAATGAGATAGTTAACAAGATTGAAGAAGCAGCAAAACCTCTTGGTTTTGATGTCCAGAAAAAAAACTACAAGATGAGGCTTGAGAATGTGAAAGCTGGAAGGAAGGGAAACCTCAATGTTGCCACGGAGATATTTCAAGTGGCACCGTCTCTTCACATGGTTGAGGTGCGGAAAGCAAAAGGTGATACATTGGAGTTCCACAAGTTCTACAAAAATCTTTCAACAAGCCTCGATGACGTTGTTTGGAAAGCTGAGGATGATATGCAAGAAATGAAGTAA 1368 0.4101 MQLFILSRFIIQKSFKMSQPKIKRRIGKYEVGRTIGEGTFAKVKFARNSETGEHVAIKILDKEKVLKHKMAEQIRREIATMKLIKHPNVVRLYEVMGSRTKIYIVLEFVTGGELFDKIVNNGRMSENEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGNLKVSDFGLSALSQQVKDDGLLHTTCGTPNYVAPEVLDDRGYDGATADLWSCGVILFVLLAGYLPFDDPNLMKLYKKISAAEFTWPPWLSFSARKLITRILDPNPMTRITISEILEDEWFKKDYKPPVFEEIWETNLDDVEAVFKDSEEHLVTEKKEEQPTAINAFELISMSKGLNLENLFDVEQGFKRETRFTSRCPANEIVNKIEEAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTSLDDVVWKAEDDMQEMK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0264 455 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0264 455 Gene3D Phosphorylase Kinase; domain 1 18 108 - -
Dere05g0264 455 CDD CIPK_C 328 437 - -
Dere05g0264 455 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Dere05g0264 455 Gene3D Transferase(Phosphotransferase) domain 1 109 310 - -
Dere05g0264 455 FunFam Non-specific serine/threonine protein kinase 22 325 - -
Dere05g0264 455 CDD STKc_SnRK3 28 283 - -
Dere05g0264 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Dere05g0264 455 SMART serkin_6 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0264 455 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 435 - -
Dere05g0264 455 ProSiteProfiles Protein kinase domain profile. 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0264 455 FunFam Non-specific serine/threonine protein kinase 321 446 - -
Dere05g0264 455 Pfam NAF domain 324 383 IPR004041 GO:0007165
Dere05g0264 455 SUPERFAMILY Protein kinase-like (PK-like) 25 302 IPR011009 -
Dere05g0264 455 Gene3D Kinase associated domain 1, KA1 321 446 - -
Dere05g0264 455 FunFam Non-specific serine/threonine protein kinase 20 108 - -
Dere05g0264 455 ProSiteProfiles NAF domain profile. 322 346 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0264 Dere-ChrDere05 3711769 3720546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0264 21 427 CBL-interacting serine-threonine protein kinases AT2G26980 81.818 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere05g0264 Pkinase 8.8e-75 CL0016