Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0254 ATGACGCTGCTATCGTTGGAGGAACAAGAGAGAGCTTCCATGGCCATGCCTGACTTTGAGGTTAGTACGCAAAAGCTGCGCGAGGATGGAGCCGCCAGTCATTTTTTGTTTGAGCTTCGAGAATGCGATCTGCTCAATATTGACGAAGCTGGAAGTGTGCTTATACGATTGCATTCCAAAATGGCGTCGTTTCTGGTGAAGTTTGGGATATTTTTGACGTTTCTTTTACTTCTATTTTCTCCGTCGCAATCTGCAGTTTTTAGCGTAGATCTAGGATCTGAGTGGCTCAAGGTAGCGGTCGTAAACCTAAAGCCCGGGCAGAGTCCAATTTCAGTAGCAATCAATGAGATGTCGAAGAGGAAATCTCCGGCTTTGGTCTCGTTTAATTCTGGTGATCGCCTACTAGGCGAAGAAGCAGCCGGTCTGGTGGCTCGGTATCCTCAAAACGTCTATTCCCAGATCAGGGACTTGATTGGCAAACCGTATAATTTTGCCAAGAAGTTTTTGGACTCAATGTACTTGCCATTTAAAATCAAGGAAGATTCAAGGGGCACTGTGAGTTTCAAAGTCGACGATAATGGCTCTGAGTATTCGGCTGAGGAATTGGTGGCGATGGTTTTGAGCTATGCTGTTAATTTAGCGGAGTTTCATTCAAAAATTCCTATAAAAGATGCCGTAATCACGGTACCGCCTTACTTTGGTCAAGCTGAACGAAATGGGTTGCTTCAGGCAGCACAATTGGCAGGAATTAATGTTCTTTCTTTGATAAACGAGCATTCTGGTGCCGCATTACAGTATGGGATTGATAAGGACTTTTCAAATGAGTCAAGGCATGTTATATTCTATGACATGGGTTCAAGCAGTACCTATGCTGCACTTGTGTATTTCTCAGCGTATACAAGTAAAGAATATGGAAAGACTGTGTCAATTAACCAATTTCAGGTTAAGGATGTCCATTGGAATCCAGAGCTGGGTGGTCAGGATATGGAATTGCAATTAGTGGAGTACTTTGCTAATGAATTTAATAAGCAAGTTGGTGATGGATTTGATGTGAGAAAGTTTCCCAAGGCTATGGCTAAATTAAAGAAACAGGTTAAACGAACCAAAGAAATTCTTAGTGCAAACACAGCTGCCCCAATTTCAGTTGAATCACTTCATGGAGACATGGACTTTAGGAGTACTATTACCCGTGAGAAGTTTGAAGAGCTCTGTGAGGATATCTGGGAAAAATCTCTTTTGCCTGTGAAAGTGGTGCTTGAGAATTCAGGCTTGATAGCAGACCAAATATATGCAGTGGAGTTGCTTGGAGGTGCTACCAGAGTGCCAAAATTACAGGCTAAGCTTCAAGAGTTCCTTGGGAGGAAAGAACTTGACAGACATCTTGATGCTGATGAAGCTATAGTCCTAGGTGCAGCACTCTATGCTGCAAATATAAGTGATGGAATCAAATTGAACCGTAAGCTTGGAATGGTTGATGGTTCAATGTATGGATTTGTGGTTGAGTTGAATGGGCCTGATCTTTTGAAAGATGAAAGCTCTAGGCAGTTACTTGTACCACGAATGAAAAAACTCCCAAGCAAGATGTTCAGATCCATTATCCATAACAAAGATTTTGAAGTTTCCCTAGCTTATGAGAGTGAAAAGCTTTTGCCACCTGGTGTTACCTCCCCTGAAGTTGCTCGATATCAAGTATCTGGGTTGACAGCTGCAAGTGAGAAGTACTCATCTCGGAATTTGTCCTCTCCCATAAAGGCAAATCTACATTTCTCTCTAAGCAGAAGTGGAATTCTATCTTTGGATCGGGCTGATGCTGTTATTGAAATATCAGAGTGGGTGGAAGTTCCTAGAAAAAATCTGACCATTGAGAATTCTACTTCTGATTCTTCGAACTTGTCAATGGAAACTGGTGGTAAAAATAGTACTGAGGAAAGCAATGAAAACTCGCAAACTGATGGAGGGGTTAATAAGACATTGAATGCTAGTGCAGAGGAGAAAGCTGCTGCTGATACTGTTACAGAGAGAAAACTGAAAAAGCGAACCTTTAGGGTTCCATTGAAGATTGATTTGAGGATGGTGGGACCTGGAATGTCTCTGTCAAAAGAGTTTCTTGCTGAAGCTAAAAGCAAATTAGAGGCATTGGACAAAAAAGATGCAGAAAGAAGAAGAACAGCAGAACTAAAAAATAACTTAGAAGGATATATTTATACAACTAAGGAAAAGATTGAAACTTTGGAGGATTGTGCAAAAGTTTCAACCAGTGAGGAACGCCAGTCCTTTGTTGAGAAGCTTGATCAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGCCAATGCTACAGAGTTTCAAGAGCATCTAGATATGTTAAAAGCAGTAGGTGATCCTATTTTCTTCAGATTGAAGGAGCTTACAGCTCGACCATTGGCAGTTGATCATGCCCGTAAATACCTTAATGAGGTGGAACAGATTGTTCAAGGATGGAAGACGAACAAGTCTTGGCTTCCAAAAGAAAAAATAGATGAGGTTCTAAATGACGCTGAAAAGTTAAAGAATTGGTTGGGTGAGAAGGAAGCTGAGCAGAAGAAGACTTCTGAATTTAGCAAGCCAGCATTTACTTCTGATGAAGTATATCTGAAGGTGTTTGATCTGCAAAGCAAGGTTGCCAGTATCAATAGAATCCCCAAACCCAAGCCCAAAATCCAGAAGCCTACAAAGAATGAAACTGAGAGCAGTAAGAATACAGATAACTCCAACTCCACCTCAACTGATAGTGCTCCCCAAAGTGACCAACCGGAAACCGACAAATCAGAAGGTTCAAAAGATGAAACAGTTGATGAGCAACCCCAAGTTCACGACGAGTTATGA 2865 0.4154 MTLLSLEEQERASMAMPDFEVSTQKLREDGAASHFLFELRECDLLNIDEAGSVLIRLHSKMASFLVKFGIFLTFLLLLFSPSQSAVFSVDLGSEWLKVAVVNLKPGQSPISVAINEMSKRKSPALVSFNSGDRLLGEEAAGLVARYPQNVYSQIRDLIGKPYNFAKKFLDSMYLPFKIKEDSRGTVSFKVDDNGSEYSAEELVAMVLSYAVNLAEFHSKIPIKDAVITVPPYFGQAERNGLLQAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVIFYDMGSSSTYAALVYFSAYTSKEYGKTVSINQFQVKDVHWNPELGGQDMELQLVEYFANEFNKQVGDGFDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHGDMDFRSTITREKFEELCEDIWEKSLLPVKVVLENSGLIADQIYAVELLGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALYAANISDGIKLNRKLGMVDGSMYGFVVELNGPDLLKDESSRQLLVPRMKKLPSKMFRSIIHNKDFEVSLAYESEKLLPPGVTSPEVARYQVSGLTAASEKYSSRNLSSPIKANLHFSLSRSGILSLDRADAVIEISEWVEVPRKNLTIENSTSDSSNLSMETGGKNSTEESNENSQTDGGVNKTLNASAEEKAAADTVTERKLKKRTFRVPLKIDLRMVGPGMSLSKEFLAEAKSKLEALDKKDAERRRTAELKNNLEGYIYTTKEKIETLEDCAKVSTSEERQSFVEKLDQVQDWLYTDGEDANATEFQEHLDMLKAVGDPIFFRLKELTARPLAVDHARKYLNEVEQIVQGWKTNKSWLPKEKIDEVLNDAEKLKNWLGEKEAEQKKTSEFSKPAFTSDEVYLKVFDLQSKVASINRIPKPKPKIQKPTKNETESSKNTDNSNSTSTDSAPQSDQPETDKSEGSKDETVDEQPQVHDEL 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0254 954 CDD HYOU1-like_NBD 88 476 - -
Dere05g0254 954 PANTHER HSC70CB, ISOFORM G-RELATED 84 932 - -
Dere05g0254 954 MobiDBLite consensus disorder prediction 622 657 - -
Dere05g0254 954 Pfam Hsp70 protein 87 798 IPR013126 GO:0005524|GO:0140662
Dere05g0254 954 MobiDBLite consensus disorder prediction 910 932 - -
Dere05g0254 954 Gene3D Actin; Chain A, domain 4 325 410 - -
Dere05g0254 954 MobiDBLite consensus disorder prediction 933 954 - -
Dere05g0254 954 FunFam Heat shock 70 kDa protein 17 486 632 - -
Dere05g0254 954 PRINTS 70kDa heat shock protein signature 117 129 - -
Dere05g0254 954 PRINTS 70kDa heat shock protein signature 461 481 - -
Dere05g0254 954 PRINTS 70kDa heat shock protein signature 225 245 - -
Dere05g0254 954 PRINTS 70kDa heat shock protein signature 429 445 - -
Dere05g0254 954 PRINTS 70kDa heat shock protein signature 85 98 - -
Dere05g0254 954 FunFam Heat shock 70 kDa protein 4 325 410 - -
Dere05g0254 954 ProSitePatterns Heat shock hsp70 proteins family signature 3. 432 446 IPR018181 -
Dere05g0254 954 Gene3D - 698 809 IPR029048 -
Dere05g0254 954 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 725 806 IPR029048 -
Dere05g0254 954 Gene3D - 152 205 - -
Dere05g0254 954 Gene3D - 271 458 - -
Dere05g0254 954 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 486 684 IPR029047 -
Dere05g0254 954 SUPERFAMILY Actin-like ATPase domain 86 270 IPR043129 -
Dere05g0254 954 Gene3D - 89 476 - -
Dere05g0254 954 MobiDBLite consensus disorder prediction 622 671 - -
Dere05g0254 954 FunFam Heat shock 70 kDa protein 4 698 810 - -
Dere05g0254 954 SUPERFAMILY Actin-like ATPase domain 276 477 IPR043129 -
Dere05g0254 954 MobiDBLite consensus disorder prediction 891 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0254 Dere-ChrDere05 3573868 3585302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0254 82 592 Calmodulin-binding Proteins AT3G12580 28.958 3.24e-63 224