Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0236 ATGTTGATGCACCAATCAAAAAGCATATTTGGAGTCAAATTATGCTATAAGACAGGACTTAAGAGTGGTGCTAGTTGATTTTTCCACAAGAGGCATGTCAGGAAATCAGGTGGCACTACTGAATGCAAATATTCATGTCACAGATGGCAGGATGGGATGCATGCAAAAGCTAATTCTAAGAGAAGGAAATTTGAGCCAAAACTAGGGAAGACTGAGTCACAAAAGGGTAGAAAGGCCCCCTCAGTAGGTAGATCTGTTAACCATAAAGGCAGTAAAAAGTCATTAAGTAAGAGGCGGCAAGTAAAGTCTCAAACCAATAAAAAGTTCCCATCAAGTATACCTCTTCGTTGTTCGGCTAGGAGGGCTAAAGGCTTGTCTCTGCAAAATCTAAGAAGTTACTGGCTTAATGATCTTTGGCTATCTCAAAAGCCAAATGATGAACGAGTAATGCTGTTTACGGAGAAAAAATGTCTTGCCCCCCGGGAAGGCTTTTCTGACTCCTTCGATCGACCTAAATGTCATATTTGTTATGGAGATGGATGTACTTTAACTTACATTGCTTGTGAAATCTGTGGAGAGTGGTTTCATGGGGATGCTTTTGGACTCACTCCAGAGAATGTCAGACAACTTATTGGATTTAGGGGCCATGTTTGTGTTGATAGGGCTGCGCCGGTCTGCCCCCATGTGAATAGTAATGCCTTGACTCATGCAGAAATCAATGGCAATGCTGCAACTGAGGGAGCAGAGGAATTATCTAAACCTTTATTACTTCAACCATTGAGTGAGACAGGCATGTTAGAGCAAGATGCTGAAGAAAATTGCATTGAGGCAGCTTATAGTTCTTACAATAATTGCATTCAAGATTGTTCATCTAACCCATGTGCATTCGTTGTAGTTACGCTTCTTTCCTGTAGGTCATATTCTGGAGTGATTCCCTAG 939 0.4143 MLMHQSKSIFGVKLCYKTGLKSGASXFFHKRHVRKSGGTTECKYSCHRWQDGMHAKANSKRRKFEPKLGKTESQKGRKAPSVGRSVNHKGSKKSLSKRRQVKSQTNKKFPSSIPLRCSARRAKGLSLQNLRSYWLNDLWLSQKPNDERVMLFTEKKCLAPREGFSDSFDRPKCHICYGDGCTLTYIACEICGEWFHGDAFGLTPENVRQLIGFRGHVCVDRAAPVCPHVNSNALTHAEINGNAATEGAEELSKPLLLQPLSETGMLEQDAEENCIEAAYSSYNNCIQDCSSNPCAFVVVTLLSCRSYSGVIP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0236 312 MobiDBLite consensus disorder prediction 55 111 - -
Dere05g0236 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 166 225 IPR013083 -
Dere05g0236 312 MobiDBLite consensus disorder prediction 55 74 - -
Dere05g0236 312 PANTHER PHD FINGER FAMILY PROTEIN 24 229 - -
Dere05g0236 312 MobiDBLite consensus disorder prediction 90 104 - -
Dere05g0236 312 SUPERFAMILY FYVE/PHD zinc finger 170 209 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0236 Dere-ChrDere05 3257960 3261555 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0236 27 231 PHD Transcription Factor Family AT5G12400 32.016 9.73e-32 123