Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0223 ATGTTTCAAGATGAAGGGTCGTCTTCTGTAACTTCATCACCTCTTCAGTTCTTCTCAATGATGTCACTTTCACCTAGCTTAGGATCTTCATCCCCATGGCTTAGAGAGCTCAAATCCGAGGAAAGGGGCTTGTACTTAATCCATTTATTGCTCACTAGTGCAAATCATGTAGCTGCTGGTAGTCTTGAAAATGCAAATATCGCTCTCGAACAAATTTCCCATCTTGCTTCCCCTGATGGCGATACCATGCAGCGAATTGCTGCATATTTTACCGAAGCACTTGCTGATCGAATACTTAAAGGATGGCCTGGTCTTCACAAAGCCCTCAATTCTACTAGAATAGTTATGGTTTCTGAAGAAATTCTGGTCCGGAAGCTGTTCTTTGAGCTGTTCCCGTTCTTGAAGGTAGCATTTGTTCTTACGAATCAGGCTATTGTTGAAGCAATGCAAGGGGAGAAGATGGTTCATATAATTGATCTAAATGCTGCTGAACCTGCACAATGGATTGCACTCATCCAAGTTTTGAGTGCACGGCCTGAAGGCCCTCCTCACTTGAGAATTACTGGGGTTCATCAACAGAAAGAGATTCTAGATCAGATGGCTCATAGATTGACTGAAGAAGCAGAAAAATTGGATATCCCATTCCAGTTCAATCCTGTCGTTAGCAAATTGGATAATCTTGATTTTGACAAACTCCGTGTGAAAACTGGGGAAGCACTAGCAATCAGTTCTCTTCTCCAATTACATTCCCTTTTGACCTTGGATGATGAAGCTTTGCGGAGAAAATCTCCTCTCCTGTCAAAAAGCTTAAATGGAAATCATCTGCAAAGAGTCCTGCCAATGAACCAAAGCACATTGGGGGATTTGCTTGAGAAAGATATGATCAATAATGGGTACAGCCCAAGTCCTGACTCAGCCTCGTCATCCCCAGCATCTTCAACTGCTTCAATGAGTATGGAGAGCTTTCTCAATGCCTTGTGGAGTTTGTCACCAAAAGTCATGGTTGTAACAGAACAGGACTCTAATCACAATGGTTCAACTCTGATGGAGAGGCTACTAGAGGCTCTATATACTTATGCAGCATTATTTGATTGTTTGGAATCAATGATCTCAAGAACGTCATTGGAAAGATTAAAGGTGGAGAAGATGCTTTTTGGCGAGGAAATCAAGAACATCGTTGCCTGTGAGGGAGCTGAAAGAAAAGAAAGGCATGAAAAGCTTGATAAGTGGCTACAGAGGCTTGATTTAGCTGGGTTTGGGAATGTGCCTCTAAGCTATTATGGGATGCTACAAGCAAGGAGGTTATTGCAGAGCTATGGTTGTGAGGGATACAAGATGAGGGAAGAAAATGGTTGTGTTGTGATTTCCTGGCAGGATAGGTCACTTTTTTCAATATCAGCTTGGAGATCTAGGAAGTAA 1419 0.4228 MFQDEGSSSVTSSPLQFFSMMSLSPSLGSSSPWLRELKSEERGLYLIHLLLTSANHVAAGSLENANIALEQISHLASPDGDTMQRIAAYFTEALADRILKGWPGLHKALNSTRIVMVSEEILVRKLFFELFPFLKVAFVLTNQAIVEAMQGEKMVHIIDLNAAEPAQWIALIQVLSARPEGPPHLRITGVHQQKEILDQMAHRLTEEAEKLDIPFQFNPVVSKLDNLDFDKLRVKTGEALAISSLLQLHSLLTLDDEALRRKSPLLSKSLNGNHLQRVLPMNQSTLGDLLEKDMINNGYSPSPDSASSSPASSTASMSMESFLNALWSLSPKVMVVTEQDSNHNGSTLMERLLEALYTYAALFDCLESMISRTSLERLKVEKMLFGEEIKNIVACEGAERKERHEKLDKWLQRLDLAGFGNVPLSYYGMLQARRLLQSYGCEGYKMREENGCVVISWQDRSLFSISAWRSRK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0223 472 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 464 IPR005202 -
Dere05g0223 472 ProSiteProfiles GRAS family profile. 37 469 IPR005202 -
Dere05g0223 472 Pfam GRAS domain family 46 469 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0223 Dere-ChrDere05 2999029 3000447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0223 1 472 GRAS Transcription Factor Family AT1G50420 71.102 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere05g0223 GRAS 1.6e-138 CL0063