Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0219 ATGGAGATAGAGGCTTCTGCGAGTGCAGGCGGTAGCGTCAGAGGCCGCAGAAATGGGGGCGGATTCGGTGCTTCGGACCCTAGGGTGCCGTATGGACTCCAGAGAGGAAGCTGTTTGGTGTGGGAGGATCTGACGGTGGTGCTTCCCAACTTCGGGAAGGGACCGACCAAGAGGTTGCTTAATGGGCTTAATGGGTATGCTGAGCCCGGTAGAATCATGGCGATTATGGGTCCTTCTGGTTCCGGCAAATCGACCTTGCTTGATTCACTTGCAGGTAGACTCTCAAAAAATGTGGTCATGACTGGAAATATATTTCTCAATGGAAAGAAGAAAAGAGTAGATTATGGTGCAGTTGCGTATGTAACACAAGAGGATGTTTTGCTGGGAACACTTACTGCCAGGGAAACCATAACTTATTCAGCATATCTACGTCTTCCAACTTCGATGACCAAAGAAGAAGTTAGTGGGATCATTGATGGAACAATCATTGAAATGGGTCTCCAAGATTGTGCGGATAGGTTGATTGGTAACTGGCACTTGAGAGGTATTAGTGGAGGGGAGAAGAAAAGACTTAGTATTGCACTTGAAATCCTTACAAGGCCTCGCTTATTGTTTCTTGATGAACCCACCAGTGGCCTTGATAGTGCCTCAGCCTTCTTTGTTGTTCAAACTCTTAGAAATGTTGCTCGTGATGGACGGACAGTAATCTCTTCAATTCACCAACCAAGCAGTGAAGTATTTGCTCTATTTGATGACCTTTTCTTACTATCTGGTGGTGAAACAGTTTATTTTGGAGAAGCAAAGATGGCTGTGGAGTTCTTTGCTGAAGCAGGATTTCCATGTCCGCGCAAAAGAAACCCCTCTGATCACTTCTTACGTTGTATCAATTCTGACTTTGACATTGTAACAGCCACTTTGAAGGGATCTCAAAGAATTCATGATGTTCCAAATTCATCAGATCCTTTCATGAACTTGGCTACAGCAGAGATTAAAGCAATGCTGGTTGAGAAATATAGGCGTTCAGTGTATGCTAGAAGGGCAAAAGAAAGGATTCGAGAACTATCCAACATTGAAGGACTAGATGCTGAAACACGAAGTGGTAGTCAAGCTAGTTGGTGGAGGCAACTTTCAACATTGACAAGAAGATCATTGGTCAACATGAGTAGAGATGTCGGTTACTACTGGTTAAGGATTATAATCTATATCATAGTATCTATATGTGTAGGAACTATATACTTTGATATCGGTTATAGCTACACTTCAATCTTGGCCCGTGGAGCGTGCGGTGCATTTATATCTGGTTTTATGACATTTATGTCAATTGGAGGTTTTCCGTCATTTATTGAAGAAATGAAGGTTTTCTATCGGGAGAGACTTAATGGATATTATGGAGTAGCAGCATATATTTTATCCAACTTCCTTTCTTCTTTCCCATTCTTGGTTGCAATTTCTATTACTACTGGCACAATTACTTATAACATGGTGAAATTCCGGCCTGGCTTTATTCACTTTTTGTTTTTCACTCTCAACATCTTTGGCTGCATAGCTGTTATAGAGAGCCTCATGATGGTTGTAGCTTCCCTTGTTCCAAATTTCCTCATGGGAATAATTACTGGTGCTGGAATAATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTGCTGTCTGATCTTCCAAAGCCAGTTTGGCGCTACCCAATATCATATCTCAGTTATGGCGCTTGGGCAATACAGGGTGCCTACAAGAATGACTTACTTGGACTTGAGTTTGATCCTCTAATACCTGGTGACCCAAAATTGAGGGGTGATTATGTCATCACGCACATGTTGGGCATGCAATTAGATCATTCCAAATGGTGGGATTTAGGAGCTCTATTCATCATTCTCGTATTTTACCGAATTCTTTTCTTTATTATTCTCAAGTTCAAGGAAAGAGCGTCGCCATTATTTCAGAGACTCCATGCCAAGAGAACATTACAAGCACTTGAAAAGAGACCTTCTTTCAGGAAAATGCCATCTTTTCCTTCAAAGAGGCATCAACCTCTCCAATCACTGTCTTCTCAAGAGGGTCTTGATTCTCCACTCCACTAG 2094 0.4222 MEIEASASAGGSVRGRRNGGGFGASDPRVPYGLQRGSCLVWEDLTVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNIFLNGKKKRVDYGAVAYVTQEDVLLGTLTARETITYSAYLRLPTSMTKEEVSGIIDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIHDVPNSSDPFMNLATAEIKAMLVEKYRRSVYARRAKERIRELSNIEGLDAETRSGSQASWWRQLSTLTRRSLVNMSRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILSNFLSSFPFLVAISITTGTITYNMVKFRPGFIHFLFFTLNIFGCIAVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYLSYGAWAIQGAYKNDLLGLEFDPLIPGDPKLRGDYVITHMLGMQLDHSKWWDLGALFIILVFYRILFFIILKFKERASPLFQRLHAKRTLQALEKRPSFRKMPSFPSKRHQPLQSLSSQEGLDSPLH 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0219 697 MobiDBLite consensus disorder prediction 670 697 - -
Dere05g0219 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 272 IPR027417 -
Dere05g0219 697 Pfam ABC transporter 60 211 IPR003439 GO:0005524
Dere05g0219 697 MobiDBLite consensus disorder prediction 678 697 - -
Dere05g0219 697 CDD ABCG_EPDR 39 265 - -
Dere05g0219 697 Gene3D - 34 278 IPR027417 -
Dere05g0219 697 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 283 IPR003439 GO:0005524
Dere05g0219 697 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524|GO:0016887
Dere05g0219 697 Pfam ABC-2 type transporter 374 584 IPR013525 GO:0016020|GO:0140359
Dere05g0219 697 MobiDBLite consensus disorder prediction 1 26 - -
Dere05g0219 697 Pfam ABC-2 type transporter 240 296 IPR043926 GO:0140359
Dere05g0219 697 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 36 666 - -
Dere05g0219 697 SMART AAA_5 69 240 IPR003593 GO:0016887
Dere05g0219 697 FunFam ABC transporter G family member 11 33 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0219 Dere-ChrDere05 2955530 2962329 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0219 55 252 Calmodulin-binding Proteins AT2G36910 30.144 2.82e-11 65.1