Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0218 ATGGAGATAGAACAAGAAACTACTGTCTATGGTAATGGAGGCAGAGGTGAGAAAGGATTGCATCTGGTGTGGAAAGACTTGGCCGTTGTGGTTCCAAACTTTGGCAATGGACACACCAAGAGATTGCTTGATAGGTTGAGTGGATATGCTGAGCCTAACAGAATCATGGCCATCATGGGACCTTCTGGCTCTGGGAAATCAACTCTTCTTGATGCTTTGGCAGGTAGGCTTCCCGGAAATGTTGTCATGACAGGGGATGTGCTTTTAAATGGAAGGAAGAAATTAGGCCATGGAGTTATAGCTTATGTGACCCAAGAAGACATATTGTTGGGAACACTAACAGTGAGAGAAACAATATCTTACTCTGCAAATCTAAGGTTTCCATCCTCTATGACAAAAGAAGAGGTGAATGACATTGTGGAGGGAACAATTATGGAAATGGGTCTCCAACAATGTGCTGATAGGCTAATTGGGAATTGGCACTTGAGAGGTATAAGTGGTGGGGAAAGGAAAAGACTAAGCATAGCACTTGAAATCCTCACAAGACCTGCCCTCTTGTTTCTTGATGAACCTACCAGTGGGCTGGATAGTGCCTCAGCATTTTTTGTTGTTCATACTCTGAGAAATATAGCTCATGATGGAAAAACTGTTATCTCTTCCATACATCAACCAAGCAGTGAAGTATTTGCACTCTTTGATGATCTTTTCCTGCTCTCTGGAGGTCAAACGGTGTACTTTGGAGCAGCCAAAAAGGCAGTTGAGTTTTTTGCCAAAGCGGGATTTCCATGTCCAAGTAGAAGAAATCCATCTGATCACTTCCTACGTTGTATTAATGCTGACTTTGATAAAGTCACAGGGACTATGATGGCTTCTCAGAAAATACCTGAACAAGAATCATCACACTCCTTAACGAACTTATCCACTGCAGAAATCAAAGCTACACTTGTTGAGAAATACCGATGGTCAGAGTATGCAAACACAGCAAGATCAAATATCAAAGAAATCTTAAACATTGGACGAGACGAGATTGAAAGCAAAAGCATGGACCAAGCCAGATGGTGGAAGCAGCTGTTAACATTGACTCATAGATCTTTCGTGAACATGTCTAGAGATGCTGGATACTACTGGATAAGGATAATAATTTATGTGGCCTTATCTCTGTGTGTTGGAACTATGTTTTTCAATGTAGGAACAAGTTACAGAGCAATTTTTGCCAGAGGATCTTGTGGTGCATTTATATCTGGTTTCATGACATTCATGTCCATTGGAGGCTTCCCATCCTTCATTGAAGAGATGAAGGTGTTTAAGAGAGAAAGGCTCAATGGGTATTATGGCATTGGTGTCTATGTTTTATCAAATTTTTTCTCTTCCTTTCCCTTTGTGGCATTGATGTCCATTGCCACTGGGATTATAACCTTCTATATGGTCAAGTTTCATCCTGGGTTTTCCCATCTTCTGTATGGATGCGTTGATCTTTTCTGCTGCATTGCTGTTGTAGAGACCTCAATGATGATTATAGCTTCACTAGTTCCAAACTTCCTCATGGGAGTGATTATTGGAGCAGGATATGTTGGTCTTATGATGATGACTTCTGGCTACTTCCGTCTGCGCCCTGATCTTCCCAAAGTGTTCTGGCGTTATCCAATCTCATACATCAATTTTGGGGCATGGGGATTGCAGGGGGCTTACAAGAACGACATGATTGGGCTGGAGTTTGATGCTATGATTCCTGGTGAGCCAAAACTGAAAGGAGAAGTCATCCTCAAAACCATGCTTGGCATGCAAGTTGATCATTCAAAATGGTGGGACTTGGCTGCAATCGCCCTCATCCTCATACTGTTTAGACTTCTTCTCTTTCTCCTTCTCAAGTTTGGGGAGAGAGTTTCACCTTTCCTTCGTAAGATCTACACCAAACAAACTCTGCAACGTATCAAGAAGCGTCCTTCCTTCAGGACATCATCTTCTTTCCCTTCCAAGAGGCACCAGCCACTGCATCCATTGTCTTCTCAAGAAGGTCTAAACTCCCCTCTTCATTAG 2037 0.4232 MEIEQETTVYGNGGRGEKGLHLVWKDLAVVVPNFGNGHTKRLLDRLSGYAEPNRIMAIMGPSGSGKSTLLDALAGRLPGNVVMTGDVLLNGRKKLGHGVIAYVTQEDILLGTLTVRETISYSANLRFPSSMTKEEVNDIVEGTIMEMGLQQCADRLIGNWHLRGISGGERKRLSIALEILTRPALLFLDEPTSGLDSASAFFVVHTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTVYFGAAKKAVEFFAKAGFPCPSRRNPSDHFLRCINADFDKVTGTMMASQKIPEQESSHSLTNLSTAEIKATLVEKYRWSEYANTARSNIKEILNIGRDEIESKSMDQARWWKQLLTLTHRSFVNMSRDAGYYWIRIIIYVALSLCVGTMFFNVGTSYRAIFARGSCGAFISGFMTFMSIGGFPSFIEEMKVFKRERLNGYYGIGVYVLSNFFSSFPFVALMSIATGIITFYMVKFHPGFSHLLYGCVDLFCCIAVVETSMMIIASLVPNFLMGVIIGAGYVGLMMMTSGYFRLRPDLPKVFWRYPISYINFGAWGLQGAYKNDMIGLEFDAMIPGEPKLKGEVILKTMLGMQVDHSKWWDLAAIALILILFRLLLFLLLKFGERVSPFLRKIYTKQTLQRIKKRPSFRTSSSFPSKRHQPLHPLSSQEGLNSPLH 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0218 678 MobiDBLite consensus disorder prediction 646 678 - -
Dere05g0218 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 257 IPR027417 -
Dere05g0218 678 Pfam ABC-2 type transporter 356 565 IPR013525 GO:0016020|GO:0140359
Dere05g0218 678 Gene3D - 21 259 IPR027417 -
Dere05g0218 678 Pfam ABC-2 type transporter 222 303 IPR043926 GO:0140359
Dere05g0218 678 Pfam ABC transporter 43 193 IPR003439 GO:0005524
Dere05g0218 678 CDD ABCG_EPDR 19 247 - -
Dere05g0218 678 ProSitePatterns ABC transporters family signature. 165 179 IPR017871 GO:0005524|GO:0016887
Dere05g0218 678 SMART AAA_5 52 241 IPR003593 GO:0016887
Dere05g0218 678 FunFam ABC transporter G family member 11 16 259 - -
Dere05g0218 678 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 22 265 IPR003439 GO:0005524
Dere05g0218 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 18 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0218 Dere-ChrDere05 2942818 2949651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0218 54 236 Calmodulin-binding Proteins AT2G36910 29.703 6.08e-10 60.8