Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0190 ATGGACACTCTTACATCAATCTGCGTCGATGCAAGGACAGTCTCAGCCACTGACATATCCATACTACCCACCCCTCTCAACCATCTCCATCCAATCGGACTACCATCACTCAAAATCAAATCGCCGCATGCCTTACAGGTGGTGTGTGTAGTGGTGTCAAAATCGCCGCTTCACGGGTGTCATAACCCATCTATATCTGATAGATCATTGTTCTTAGTAGCCATGTCCAGCACAGCTGGTCAAGTCATCAAGTGCAGAGCGGCGGTGGCATGGGAGGCAAGCAAGCCACTAGTGATAGAAGAAATAGAGGTGGCGCCACCACAGGCCGGTGAAGTGCGTCTGAAGATCCTCTTCACCTCTCTTTGCCGTACTGATGTTTACTTCCAGGATACTACGGGCCAAACTCCGTTGTTCCCTCGTATACTTGGCCACGAAGGTGCAGGAATTGTGGAGAGCGTAGGGGAAGGAGTGACACATCTGAAGCCAGGAGACAAAGCCCTACCTGTGTTCACAGGAGAGTGTGGCAAATGTGTACACTGCAAGTCAGAAGAGAGCAACTTGTGTGAGCTTCTCAGGATCAACACAGACAGAGGAGTAATGCTCAGTGATGGCAAAACAAGGTTCTCCAAAAATGGGAAACCCATTTACCACTTCGTTGGAACCTCCACCTTCAGCGAATACACCGTCCTCCACGAAGGCTGCGTCGTCAAGATCAACCCCGCCGCCCCACTCGACAAAGTTTGCGTCCTCAGCTGCGGATTTTGCACTGGTTTTGGTGCTACTGTTAATGTTGCAAAACCAAAGCCAGGTTCTTCTGTTGCTGTCTTTGGACTTGGAGCTGTTGGCCTTGCTGCTGCTGAAGGCGCAAGGGTTAGTGGTGCATCTAGAATCATTGGGGTTGATTTATTTCCCAGCCGTGCTAAGCAGGCAAAGGAGTTTGGGGTCACAGACTTTCTGAACCCAAAAGATTATGAAAAGCCTATACAAGAGGTGATTCGTGAAATGACCAATGGAGGAGTTGATCGTGCTATTGAATGCACTGGGAACGTCAAAGCTTCCATCCAAGCATTCGAAAGTGTTCACGATGGTTGGGGTGTTGCAGTACTAGTTGGTGTGCCTACCAAAGATGCAGAGTTCAAAACGCATCCTATGAGATTCCTGGAAGAGAGGACACTTAAGGGCACTTTCTATGGCAACTTCAAACCTCTCTCTGATCTTCCTTCTGTGGTAGAAAAGTACATGAACAAGGAGCTGGAAGTGGACAAGTTCATCACCCACAACATCCCATTCTCAGAGATTAACAAAGCATTTGAATACATGCTTACTGGGCAGTCCATTAGGTGCGTCATGTACTTGTAA 1359 0.4842 MDTLTSICVDARTVSATDISILPTPLNHLHPIGLPSLKIKSPHALQVVCVVVSKSPLHGCHNPSISDRSLFLVAMSSTAGQVIKCRAAVAWEASKPLVIEEIEVAPPQAGEVRLKILFTSLCRTDVYFQDTTGQTPLFPRILGHEGAGIVESVGEGVTHLKPGDKALPVFTGECGKCVHCKSEESNLCELLRINTDRGVMLSDGKTRFSKNGKPIYHFVGTSTFSEYTVLHEGCVVKINPAAPLDKVCVLSCGFCTGFGATVNVAKPKPGSSVAVFGLGAVGLAAAEGARVSGASRIIGVDLFPSRAKQAKEFGVTDFLNPKDYEKPIQEVIREMTNGGVDRAIECTGNVKASIQAFESVHDGWGVAVLVGVPTKDAEFKTHPMRFLEERTLKGTFYGNFKPLSDLPSVVEKYMNKELEVDKFITHNIPFSEINKAFEYMLTGQSIRCVMYL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0190 452 Gene3D - 257 395 - -
Dere05g0190 452 SMART PKS_ER_names_mod 93 450 IPR020843 GO:0016491
Dere05g0190 452 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 143 157 IPR002328 GO:0008270|GO:0016491
Dere05g0190 452 FunFam Alcohol dehydrogenase class-P 257 395 - -
Dere05g0190 452 SUPERFAMILY GroES-like 403 451 IPR011032 -
Dere05g0190 452 FunFam alcohol dehydrogenase 1-like isoform X1 93 256 - -
Dere05g0190 452 SUPERFAMILY GroES-like 78 260 IPR011032 -
Dere05g0190 452 Gene3D - 94 444 - -
Dere05g0190 452 Pfam Alcohol dehydrogenase GroES-like domain 110 238 IPR013154 -
Dere05g0190 452 CDD alcohol_DH_plants 83 450 - -
Dere05g0190 452 Pfam Zinc-binding dehydrogenase 280 399 IPR013149 -
Dere05g0190 452 PANTHER ALCOHOL DEHYDROGENASE 80 450 - -
Dere05g0190 452 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 243 416 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0190 Dere-ChrDere05 2452038 2461291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0190 111 413 Monolignol Biosynthesis Gene Families AT4G37990 25.246 6.42e-15 73.9