LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere05g0153	ATGGCTGGTAATCAGTTAAAAGTTCTTAAAGCACTTGATGCTGCCAAAACACAATGGTACCACTTTACCGCAATATTGATTGCAGGCATGGGTTTCTTCACTGATTCTTACGATCTCTTCTGCATCTCCCTCGTCACCAAACTTCTTGGCCGTTTATATTACTTCAAAGAAGGCTCCTCCGTCCCTGGCTCTCTTCCTTTCAACGTCTCCGCCGCCATAAACGGTGTCGCATTCTGCGGCACCCTCGTGGGTCAGCTCTTCTTCGGCTGGCTCGGAGACAAGCTGGGCAGAAAACGCGTCTATGGAATAACCCTAATGCTCATGGTGGTTTCTTCCTTAGCCTCTGGTCTCTCTTTTGGGTCTGATCCTAAAGCTGTTATGGCCACCCTCTGCTTCTTCCGCTTCTGGCTTGGCTTCGGCATTGGAGGCGACTACCCTCTCTCTGCGACTATCATGTCTGAGTATTCCAGCAAGAAGACTCGTGGGGCTTTCATTGCTGCAGTTTTCGCCATGCAAGGGTTTGGGATTCTCGCTGGTGGAATGGTCGCGATCATAGTCTCAGCAGCTTTCAAGGCCTTTTATCCTGCACCTTCGTACCAGAACGACCCCGTTTTATCCACAGTTCCTGAAGCTGATTATGTATGGAGGATCATCCTCATGTTTGGTGCTATCCCAGCTCTTGTCACTTACTATTGGCGTATGAAGATGCCGGAAACTGCTAGATACACTGCGTTGGTTGCGAAGAACACAACGCAAGCAGCTTCAGATATGTCGAAAGTACTTCAGGTTGAGATAGAAGCAGAAAGTGATAATCAGAAGATTGATGAGCAGCTGAATAGTAACCAGTTTGGGTTATTCTCGAAGGAGTTTCTTCGCCGCCATGGGCTGCACTTGGTTGGAACCACCACCACGTGGTTTCTTCTGGATATAGCATTCTACAGCCAGAATCTGTTTCAGAAAGACATCTTCACTGCTATTGGGTGGCTTGCTGATGCCAAAACCATGAGCGCCATTGAAGAGGTTTACAAGATCGCAAGAGCTCAGACTCTTATCGCCATCTGCAGCACTGTCCCTGGCTACTGGTTCACTGTGGCTCTCATTGATAGGATCGGGAGGTTGAGGATACAGTTAATGGGGTTCTTCTTCATGACCGTTTTCATGTTTGCCTTAGCCATTCCTTACAATCATTGGACCTTAAGCGGCAACCAAATCGGGTTCGTGGTGATGTACTCGTTCACCTTCTTCTTCTGCAACTTTGGACCAAATGCTACAACGTTCATCGTCCCCGCAGAGATCTTCCCTGCGAGGCTGAGATCTACGTGCCATGGAATCTCAGCTGCAGCAGGCAAGGCTGGAGCAATAGTGGGGTCTTTTGGGTTCCTTTATGCTTCAAATGCCATTGGAGTGAGAAAAACTCTCATAATTCTGGGTGTGATCAACTTCCTGGGGTTGCTGTTTACGTTTTTGGTGCCTGAACCGAAAGGAAAATCGCTGGAGGAGATGTCTGGTGAGGGACAGGAAGAAGAGAACAGTACTACTGATGTTCGTAGAGACTCAGGGATTGAGGCTGTCTAA	1575	0.4825	MAGNQLKVLKALDAAKTQWYHFTAILIAGMGFFTDSYDLFCISLVTKLLGRLYYFKEGSSVPGSLPFNVSAAINGVAFCGTLVGQLFFGWLGDKLGRKRVYGITLMLMVVSSLASGLSFGSDPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYSSKKTRGAFIAAVFAMQGFGILAGGMVAIIVSAAFKAFYPAPSYQNDPVLSTVPEADYVWRIILMFGAIPALVTYYWRMKMPETARYTALVAKNTTQAASDMSKVLQVEIEAESDNQKIDEQLNSNQFGLFSKEFLRRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLADAKTMSAIEEVYKIARAQTLIAICSTVPGYWFTVALIDRIGRLRIQLMGFFFMTVFMFALAIPYNHWTLSGNQIGFVVMYSFTFFFCNFGPNATTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGSFGFLYASNAIGVRKTLIILGVINFLGLLFTFLVPEPKGKSLEEMSGEGQEEENSTTDVRRDSGIEAV	524

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere05g0153	524	Gene3D	MFS general substrate transporter like domains	20	518	IPR036259	-
	Dere05g0153	524	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	21	493	-	-
	Dere05g0153	524	MobiDBLite	consensus disorder prediction	497	524	-	-
	Dere05g0153	524	Pfam	Sugar (and other) transporter	26	502	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Dere05g0153	524	SUPERFAMILY	MFS general substrate transporter	12	502	IPR036259	-
	Dere05g0153	524	CDD	MFS_PhT	25	494	-	-
	Dere05g0153	524	NCBIfam	phosphate:H+ symporter	10	504	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Dere05g0153	524	FunFam	Inorganic phosphate transporter 1-6	20	516	-	-
	Dere05g0153	524	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	24	495	IPR020846	GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere05g0153	Dere-ChrDere05	1959716	1961290	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere05g0153	1	510	Inorganic Solute Cotransporters	AT3G54700	75.908	0.0	822