Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0117 ATGGCATTGTTCTCTGTTGTGGGATTCTTCAGCAACTATACAAGGTTGATCTCTTTTATGATCATATTTGGCAGGTACTGCTTTCAATTAGGCATAGCAAGAAGCACCATCTCATTATCTCACTTCATCAAGGACCCTGAAACTCTTAACTCAAACCGTAGTTTGTTCACACTGGGTTTCTTCAACCCTCAAAATTCTACAAATCGCTATGTGGGAATTTGGTTGATGTCCAAATCCACTGTCATATGGATAGCTAACAGAAACCAACCACTCAGGGATTCTTCTGGGACTATTACAATATCAGAGGACGGCAATCTTGTTGTATTAGATGGACAGAAGCAGACCATTTGGTCATCAAATTTGTCATATATTGCATCCAATACAACTTGCCGGCTTTTAGATTCTGGAAACCTTGTCCTACTTGATAACTCTTCAGGAAACATCATATGGCAAAGTTTTGAGCATCCTTCAGATGCTTTAATGCCAAACATGAAAATTACTAGCAACAAAAGAACAGGTGAGAGAATGAAGATTACATCATGGAAAAGTCCCTCTGATCCAACTCCTGGGAATTTCTATCTGAGTCTTGAACGACTAGATCTTCCAGAACTGTTTATATGGAATGTAACTCGCCCATACTGGCGCAGTGGTCCATGGAATGGTAAGGTCTTTATGGGATTACCCATTATGAGTTCTCATTATAATAGTGGCTCCAATATGATATATGGGATAGATGGAACTATTTCTTATACTTACGTTTTACAAGATGGGTCTGACATTATCAAACTCGGTATCCTGAATTCAGAAGGCAAGTTGTTGAAAAAACTATGGGATGATGCCAGGAAGCAATGGCAAGTAACCTATGTGGGTCCAAATTACTGTGATGTTTATGGAATATGTGGAGCTTTTGGAATCTGTAATCTAGAAAGTACACCATCATGTAGTTGTTTGAGAGGATTTGAACCAAGCAGCGAAGAGGAATGGGAAAGACAAAACTGGATTGATGGTTGTGTTAGGAGAACAACACTGCAGTGTGAAAGAGTAAAAAATGGGAGTGCAGATGGAAAAGATGGGTTTATCCATCTGCAGAATGTTAAAGTACCAGATTTTGGAGAATGGTCATCGGCTTCAGATGATGATTGCAGAAGGCAATGCTTGGAGAATTGCACTTGCATAGCATATTCTTATGATTCTGTGATCGGCTGTACTTCTTGGAGAGGAAATCTTATTGACATACAGCAGTTCTCATATGGAGGACTTGACCTATATATTCGTGCAGCCTATTCAGATCTTGAATATGCAATGCAAGGATTGTTTTCAGAGAAATCAGATGTATTTAGTTTTGGGGTTTTACTACTAGAGATTATCAGTGGAAGAAGAAACTCAAGTTTTTATAACTATGAACATTCTCTCAGCCTTTTAGGATTTGCTTGGAAATTATGGAATGAAGATAATATTGTAACATTAATAGATCCTGTAATATCCGATCCAAACCTTGAGAAGGATATATTTAGATGCATACACATAGGACTTCTGTGTGTGCAAGACCTTGCAAAGGAGAGACCAAGTATGAGCACTGTGGTTTTGATGCTTAATAGTGAGATTGTCAATCTTCCTCCTCCAATGCAACCTGCATTCATCCAGTGGCAGAATATGTCGAGTTATGTGACCCCAGAAGAAAGTCAAAGATTATTTTCGATCAATGGTGTCAGTATCAGTGACATACTTGGAAGATAG 1737 0.3869 MALFSVVGFFSNYTRLISFMIIFGRYCFQLGIARSTISLSHFIKDPETLNSNRSLFTLGFFNPQNSTNRYVGIWLMSKSTVIWIANRNQPLRDSSGTITISEDGNLVVLDGQKQTIWSSNLSYIASNTTCRLLDSGNLVLLDNSSGNIIWQSFEHPSDALMPNMKITSNKRTGERMKITSWKSPSDPTPGNFYLSLERLDLPELFIWNVTRPYWRSGPWNGKVFMGLPIMSSHYNSGSNMIYGIDGTISYTYVLQDGSDIIKLGILNSEGKLLKKLWDDARKQWQVTYVGPNYCDVYGICGAFGICNLESTPSCSCLRGFEPSSEEEWERQNWIDGCVRRTTLQCERVKNGSADGKDGFIHLQNVKVPDFGEWSSASDDDCRRQCLENCTCIAYSYDSVIGCTSWRGNLIDIQQFSYGGLDLYIRAAYSDLEYAMQGLFSEKSDVFSFGVLLLEIISGRRNSSFYNYEHSLSLLGFAWKLWNEDNIVTLIDPVISDPNLEKDIFRCIHIGLLCVQDLAKERPSMSTVVLMLNSEIVNLPPPMQPAFIQWQNMSSYVTPEESQRLFSINGVSISDILGR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0117 578 SMART blect_4 40 156 IPR001480 -
Dere05g0117 578 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Dere05g0117 578 CDD B_lectin 40 156 IPR001480 -
Dere05g0117 578 ProSiteProfiles Bulb-type lectin domain profile. 34 153 IPR001480 -
Dere05g0117 578 Pfam PAN-like domain 354 412 IPR003609 -
Dere05g0117 578 SUPERFAMILY Protein kinase-like (PK-like) 427 561 IPR011009 -
Dere05g0117 578 Pfam Protein tyrosine and serine/threonine kinase 426 527 IPR001245 GO:0004672|GO:0006468
Dere05g0117 578 Gene3D - 30 153 IPR036426 -
Dere05g0117 578 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 187 IPR036426 -
Dere05g0117 578 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 153 - -
Dere05g0117 578 CDD PAN_AP_plant 341 425 - -
Dere05g0117 578 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 428 523 - -
Dere05g0117 578 Gene3D Transferase(Phosphotransferase) domain 1 360 537 - -
Dere05g0117 578 ProSiteProfiles PAN/Apple domain profile. 345 427 IPR003609 -
Dere05g0117 578 SMART ntp_6 354 426 IPR003609 -
Dere05g0117 578 Pfam D-mannose binding lectin 80 182 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0117 Dere-ChrDere05 1559835 1563155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0117 426 578 Receptor kinase-like Gene Family AT4G23140 46.203 9.93e-35 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere05g0117 PK_Tyr_Ser-Thr 1.6e-05 CL0016