Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0116 ATGAAGAAAAGTCTGAGTAAAAATCAGCCTTCGTCCATGGCGTTGTTCTCTGTTATGGGATCCTTGTGCAGGCACACAAGCTTGTTCTCCGTTATCATCATATTTTGCAGCTTCTGCTTTGAATTAGGTATTGCCACAAATGCCATTGCATCATCTCACTTCATCAAGGACCCTGAAACTCTTAGCTCCAATCAGAGTTTGTTCACGCTGGGTTTCTTCAACCCTCAAAATTCTACAAATCGCTATGTGGGAATTTGGTTGATGTCCAAATCCACTGTCATATGGGTAGCTAACAGAAACCAACCACTCAGGGATTCTTCTGGGACTATTACAATATCAGAGGACGGCAATCTTGTTGTATTAGATGGACAGAAGCAGACCATTTGGTCATCAAATTTGTCATATATTGCATCCAATACAACTTGCCGGCTTTTAGATTCTGGAAACCTTGTCCTACTTGATAACTCTTCAGGAAACATCATATGGCAAAGTTTTGAGCATCCGTCAGATACTATAATGCCAAACATGAAAATTACTAGCAACAAAAGAACAGGTGAGAGAATGAAGATTACATCATGGAGAAGTCCCTCTGATCCAACTCCTGGGAATTTCTATCTGAGTCTTGAACGACTAGATCTTCCAGAACTGTTTATATGGAATGTAACTCGTCCATACTGGCGCAGTGGTCCATGGAATGGTAAGGTCTTTATGGGATTACCCATTATGAGTTCTCATTATCATAGTGGCGCCAATATGATATATGGGATAGATGGAACTATTTCTTATACTTACGTTTTACAAGATGGGTCTGACATTAACAAACTCGGTATCCTGAATTCAGAAGGCAAGTTGTTGAAAAAACTATGGGATGATGCCAGGAAGCAATGGCAAGTAACCTATGTGGGTACAAATTACTGTGAAGTTTATGGAATATGTGGAGCTTTTGGAAGCTGTAATCTAGACAGTACACCATCATGTAGTTGTTTGAGAGGATTTGAACCAAGCAACGGAGAGGAATGGGAAAGACAAAACTGGATTGATGGTTGTGTCAGGAGAACAGCACTGCAGTGTGAAAGAGTAAAAAATGGGAGTGCAGATGGAAAAGATGGGTTTATCCATCTGCAGAATGTTAAAGTACCAGATTTTGGAGAATGGTCATTGGCTTCAGAAGGTGATTGCAGAAGGCAATGCTTGGAGAATTGCACTTGCATAGCATATTCTTATGATTCTGAGATCGGCTGTATTTCTTGGAGAGGAAATCTTATTGACATACAGCAGTTCTCATATGGAGGACTTGACCTATATATTCGTGCAGCCTATTCAGATCTTGGTATGGAGCTATTGGCATATGATTTTAAAAAGGTTGCAATTGCTACAAACAACTTTCACATGTCTAATAAACTTGGGCAAGGTGGTTTTGGCCCCGTGTATAAGGGAACACTGCAAGATGGCCAGGACATAGCAGTTAAGAGACTTTCTAGAGCATCAGGACAAGGACTACATGAATTTATGAATGAGGTGCTTGTCATTTCAAAGCTTCAACACCGGAATCTTGTAAAACTTCTAGGCTGTTGTATTGAAAGCGGAGAAAAGATGTTGATTTATGAATACATGCCAAATAAAAGTTTGGATGCATTTATTTTCGATCCACCAAAACATAAACTCCTAGATTGGAGAAAGCGCTTTGCCATAATTGAAGAAGTAGCTCGAGGAATACTTTATCTTCACAGAGATTCTAGGCTAAAAATTATACACAGGGACCTAAAGGCTAGCAATATCTTGCTAGATGAGAACTTGATTCCAAAAATATCAGATTTTGGTATGGCTAAAATTTTTAGAGGGAGTGAAGATCATGCTAACACAAGAAGAGTTGTTGGAACCTACGGTTATATGTCCCCAGAATATGCAATGCAAGGATTGTTTTCAGAGAAATCAGATGTATTTAGTTTTGGAGTTCTACTACTAGAGATTGTCAGTGGAAGAAGAAACTCAAGCTTTTATAACAATGAGCATTCTCTCAGCCTTTTAGGATTTGCGTGGAAATTATGGAATGAAGATAATATTGTAACATTAATAGATCCTATATTGTCTGATCCAAACCTTGAGAAGGATATATTTAGATGCATACACATAGGACTTCTGTGTGTGCAAGACCTTGCAAAGCAGAGGCCAAGTATGAACACTGTGGTTTCGATGCTTAATAGTGAGATTGTGAATCTTCCTCCTCCAATGCAACCTGCATTCATCCAGTGGCAGAGTATGTCAAGTTATGTGACCCCAGAAGAAAGTCAAAGATTATTTTCAATCAATGGTGTCAGTATCAGTGACATACTTGGAAGATAG 2343 0.3914 MKKSLSKNQPSSMALFSVMGSLCRHTSLFSVIIIFCSFCFELGIATNAIASSHFIKDPETLSSNQSLFTLGFFNPQNSTNRYVGIWLMSKSTVIWVANRNQPLRDSSGTITISEDGNLVVLDGQKQTIWSSNLSYIASNTTCRLLDSGNLVLLDNSSGNIIWQSFEHPSDTIMPNMKITSNKRTGERMKITSWRSPSDPTPGNFYLSLERLDLPELFIWNVTRPYWRSGPWNGKVFMGLPIMSSHYHSGANMIYGIDGTISYTYVLQDGSDINKLGILNSEGKLLKKLWDDARKQWQVTYVGTNYCEVYGICGAFGSCNLDSTPSCSCLRGFEPSNGEEWERQNWIDGCVRRTALQCERVKNGSADGKDGFIHLQNVKVPDFGEWSLASEGDCRRQCLENCTCIAYSYDSEIGCISWRGNLIDIQQFSYGGLDLYIRAAYSDLGMELLAYDFKKVAIATNNFHMSNKLGQGGFGPVYKGTLQDGQDIAVKRLSRASGQGLHEFMNEVLVISKLQHRNLVKLLGCCIESGEKMLIYEYMPNKSLDAFIFDPPKHKLLDWRKRFAIIEEVARGILYLHRDSRLKIIHRDLKASNILLDENLIPKISDFGMAKIFRGSEDHANTRRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVSGRRNSSFYNNEHSLSLLGFAWKLWNEDNIVTLIDPILSDPNLEKDIFRCIHIGLLCVQDLAKQRPSMNTVVSMLNSEIVNLPPPMQPAFIQWQSMSSYVTPEESQRLFSINGVSISDILGR 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0116 780 SMART ntp_6 366 438 IPR003609 -
Dere05g0116 780 SUPERFAMILY Protein kinase-like (PK-like) 445 764 IPR011009 -
Dere05g0116 780 Pfam PAN-like domain 366 424 IPR003609 -
Dere05g0116 780 Gene3D Transferase(Phosphotransferase) domain 1 538 739 - -
Dere05g0116 780 PIRSF SRK 18 446 IPR024171 GO:0004674
Dere05g0116 780 PIRSF SRK 439 780 IPR024171 GO:0004674
Dere05g0116 780 CDD STKc_IRAK 468 734 - -
Dere05g0116 780 CDD PAN_AP_plant 353 437 - -
Dere05g0116 780 Gene3D Phosphorylase Kinase; domain 1 437 537 - -
Dere05g0116 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 42 165 - -
Dere05g0116 780 CDD B_lectin 52 168 IPR001480 -
Dere05g0116 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Dere05g0116 780 Gene3D - 42 165 IPR036426 -
Dere05g0116 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 435 537 - -
Dere05g0116 780 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 32 725 - -
Dere05g0116 780 ProSiteProfiles Bulb-type lectin domain profile. 46 165 IPR001480 -
Dere05g0116 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 199 IPR036426 -
Dere05g0116 780 Pfam S-locus glycoprotein domain 226 335 IPR000858 GO:0048544
Dere05g0116 780 ProSiteProfiles Protein kinase domain profile. 462 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0116 780 Pfam D-mannose binding lectin 92 194 IPR001480 -
Dere05g0116 780 SMART blect_4 52 168 IPR001480 -
Dere05g0116 780 ProSiteProfiles PAN/Apple domain profile. 357 439 IPR003609 -
Dere05g0116 780 SMART serkin_6 462 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0116 780 Pfam Protein tyrosine and serine/threonine kinase 463 731 IPR001245 GO:0004672|GO:0006468
Dere05g0116 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 538 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0116 Dere-ChrDere05 1550466 1553817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0116 442 748 Receptor kinase-like Gene Family AT4G23230 56.678 3.83e-123 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere05g0116 PK_Tyr_Ser-Thr 7e-49 CL0016