Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0112 ATGAACGAGGTGCTTGTCATTTCAAAGCTTCAACATCGTAATCTTGTAAAACTTCTAGGTTGCTGTATTGAAGGTGAAGAAAAGATGTTGATTTATGAGTACATGCCAAATAAAAGTTTGGATGCATTTATCTTCGATCCATCACAACAAAAACTCCTAGATTGGAGAAAGCGCGTTTCCATAATTGAAGGAGTAGCTCGAGGAGTACTTTATCTTCACAGAGATTCTAGGCTAAAAATTATACACAGGGACCTAAAGGCAAGTAATATCTTGCTGGATGAGAACTTGATTCCAAAAATATCAGATTTTGGTATGGCTAAAATTTTTAGAGGGAGTGAAGATCATGCTAACACAAGAAGAGTTGTTGGAACCTACGGCTATATGTCCCCAGAATATGTGATGCAAGGATTATTTTCAGAGAAATCAGATGTATTTAGTTTTGGAGTTTTACTACTAGAGATTGTCAGTGGAAGAAAAAACTCAAGTTTTTATAACAAAGAGCATTCTCTCAACCTTTTCGGATTTGCGTGGAAATTATGGAATGAAGATAATATTGTAACATTAATAGATCCTGTAATATCTGATCCAAACCTTGAGAAGGATATATTTAGATGCATACACATAGGACTCCTGTGTGTGCAAGACCTTGCAAAGGAGAGGCCAAGTATGAGCACTGTGGTTTCTATGCTTAATAGTGAGATTGTCAATCTTCCTCCTCCAATGCAACCTGCATTCATCCAGTGGCAGAGTATGTCAAGTTATGTGACCCCAGAAGAAAGACAAAGAATATTTTCGATCAATGGTTTCAGTATTAGTGACATACCTGGTAGATAG 834 0.3681 MNEVLVISKLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDAFIFDPSQQKLLDWRKRVSIIEGVARGVLYLHRDSRLKIIHRDLKASNILLDENLIPKISDFGMAKIFRGSEDHANTRRVVGTYGYMSPEYVMQGLFSEKSDVFSFGVLLLEIVSGRKNSSFYNKEHSLNLFGFAWKLWNEDNIVTLIDPVISDPNLEKDIFRCIHIGLLCVQDLAKERPSMSTVVSMLNSEIVNLPPPMQPAFIQWQSMSSYVTPEERQRIFSINGFSISDIPGR 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0112 277 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 272 - -
Dere05g0112 277 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 35 238 - -
Dere05g0112 277 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0112 277 SMART serkin_6 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0112 277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Dere05g0112 277 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Dere05g0112 277 SUPERFAMILY Protein kinase-like (PK-like) 1 261 IPR011009 -
Dere05g0112 277 Gene3D Transferase(Phosphotransferase) domain 1 35 236 - -
Dere05g0112 277 Pfam Protein tyrosine and serine/threonine kinase 1 229 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0112 Dere-ChrDere05 1503313 1504546 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0112 2 245 Receptor kinase-like Gene Family AT4G23230 58.197 1.36e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere05g0112 PK_Tyr_Ser-Thr 1.4e-40 CL0016