Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0102 ATGGAATTCAAGATCAGAAGCTATGAAGAGCAGTCTGATAGAGCTCAAGTGGAAGATCTCGAGAGAAGATGCGAGGTAGGGCCAGCAGAAAGCGTTTTTCTCTTCACAGACACTATGGGTGACCCCATTTGCAGAATCCGAAACAGTCCCATGTACAAGATGCTGGTAGCAGAGATGGACAAGGAATTGGTCGGTGTCATTCAAGGCTCTATAAAACTGGTCACAGTAGCTAATAACGATTTGGCTAAGGTAGGCTATGTCCTAGGCCTAAGGGTAGTGCCCCATCTTCGTCGAAAAGGGATTGGCTCAAGCCTAGTTCTAAAACTAGAAGAATGGTTCAATTCAAAGGATGTGGACTACGCATACATGGCCACAGAGAAAGAAAACCAAGCCTCGGTTCGTCTTTTCATGGACAAGTTTGGGTACACCAAGTTTAGGACACCCTCTATACTGGTGAACCCAGTGAGCCATCGTTGCTTCAGAATCTCATCCAACATTGAGATTTCAATGGTCAAGATTGATCAAGCTGAGTCTCTGTATAGAAGATTCATGGGGTCCACTGAGTTCTTCCCTCATGACATAGACAATATACTAAGGAACAAGCTTAGTTTGGGGACATGGGTGGCTCATTTCAAAGGAGATTATTTTGGGTGTGATGGCCAAACAGTCCCTAATAGTTGGGCTATGCTTAGTGTGTGGAACAGTGGGGAAATTTTCAAGCTAAGGCTAGGGAAAGCACCTTTATCTTGCTTGTTGTACACTAAGAGTTGGGGGTTGATTGATAAGATTTTCCCATGCTTGAAGCTTCCTACTCTGCCTGATTTCTTTAGTCCATTTGGATTCTATTTCATGTATGGGGTTTATCACGAAGGGCCATTGTCTGGGAAGCTTGTGAGAGGGTTGTGTGAGTTTGTGCACAACATGGCTGCGAAGTGTAAGGATGAGAATTGTAAGATTGTTGTGACGGAAGTTGGAGGAAGAGATGAGCTCAAACGTCACATTCCACATTGGAAATTGCTGTCTTGCCCAGAGGATTTGTGGTGCATAAAGGCCTTGAAAAATGAAGCCACCAACAGTACGTTTCAATTTCATGAGCTAACCAAAACCCCACCAACAAGGGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1149 0.4421 MEFKIRSYEEQSDRAQVEDLERRCEVGPAESVFLFTDTMGDPICRIRNSPMYKMLVAEMDKELVGVIQGSIKLVTVANNDLAKVGYVLGLRVVPHLRRKGIGSSLVLKLEEWFNSKDVDYAYMATEKENQASVRLFMDKFGYTKFRTPSILVNPVSHRCFRISSNIEISMVKIDQAESLYRRFMGSTEFFPHDIDNILRNKLSLGTWVAHFKGDYFGCDGQTVPNSWAMLSVWNSGEIFKLRLGKAPLSCLLYTKSWGLIDKIFPCLKLPTLPDFFSPFGFYFMYGVYHEGPLSGKLVRGLCEFVHNMAAKCKDENCKIVVTEVGGRDELKRHIPHWKLLSCPEDLWCIKALKNEATNSTFQFHELTKTPPTRALFVDPREV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0102 382 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 382 - -
Dere05g0102 382 Pfam Acetyltransferase (GNAT) family 47 142 IPR000182 GO:0016747
Dere05g0102 382 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 3 175 IPR000182 GO:0016747
Dere05g0102 382 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 146 IPR016181 -
Dere05g0102 382 CDD NAT_SF 54 122 - -
Dere05g0102 382 Gene3D - 4 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0102 Dere-ChrDere05 1367339 1368621 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere05g0102 Acetyltransf_1 7.3e-14 CL0257