Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0096 ATGTTGGTGCGTCTTCTGATGCTTGCTTGCTGTGAAATGGAAGGCGTGAGCAGCCCAAAACCCTCGCTCTCTAGCATCAAGACAGGCTGTGATGAAATGGGAGGCGTGCGTGGCAGCACCGGTGGTGAAATGGGAGGCCAATCATCATCATCATCATCTAAGCCTCCTTCGATTGCAACTTCACCAGTTCGTTTACACCAGAAACAACCTCAGCCTCATGATCCTCATTCTCCTGATACTGTTGATGCTATTGCTAACACAGAGCAAGACATGAAGCAACAGCATCAAGCGACAGCCTCTAACCCCAAAACTGAAGAAATACGAGTACGACCACCTTCGGATCCCAGAAGGCTGAAGCGAGTGGTGTCTAATCGGATGTCTGCTCAGAAATCCAGATTGAGGCAGCTTCAACATGAGGCTTGTCTGGAGAGGCAATGCGAAGAATTAGAGAATCAGATAGCTTTTCTTAAGCCACAAGTTGCAGCCTATTCCAATAACAAACAGCAATTGATGATGGAGCAAATGGTCTTGAGGCAAAAACTCGCGGCCCTTGACATGGAAATCGCCGCGAAACAAGTTGAAATTGAAAGGAACCAAGCAGAAGTGCATATGCTGAGGGAAGTAGAGAAGCGACAGAAAGAAGAAGCTCGAGCAATGATGGCTCACTTTAATTGGGACGCTGCTTCCGGAAATCAATTTGTCCCTGAACAAATGGTTTATACAAATGTTCCAGCTCAAGTGTTTGGCGGTTCTGAAAACAATGAAGAACGAACATTAGGAATGGAAGTGGATGAGCAAACACGGGATTCCTTCTACCGTGCTGGCTCAGTGAGTGAGTTGGACGCCATTGTTAACCCTCCAAAGCAAAGCGACAAGGAGTCCGACCCTGTGTTTTATTTTGGCTTTTAG 909 0.4686 MLVRLLMLACCEMEGVSSPKPSLSSIKTGCDEMGGVRGSTGGEMGGQSSSSSSKPPSIATSPVRLHQKQPQPHDPHSPDTVDAIANTEQDMKQQHQATASNPKTEEIRVRPPSDPRRLKRVVSNRMSAQKSRLRQLQHEACLERQCEELENQIAFLKPQVAAYSNNKQQLMMEQMVLRQKLAALDMEIAAKQVEIERNQAEVHMLREVEKRQKEEARAMMAHFNWDAASGNQFVPEQMVYTNVPAQVFGGSENNEERTLGMEVDEQTRDSFYRAGSVSELDAIVNPPKQSDKESDPVFYFGF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0096 302 SMART brlzneu 112 176 IPR004827 GO:0003700|GO:0006355
Dere05g0096 302 CDD bZIP_plant_RF2 117 168 IPR044759 GO:0003700|GO:0006355
Dere05g0096 302 MobiDBLite consensus disorder prediction 82 103 - -
Dere05g0096 302 MobiDBLite consensus disorder prediction 14 114 - -
Dere05g0096 302 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 119 134 IPR004827 GO:0003700|GO:0006355
Dere05g0096 302 Gene3D Classic Zinc Finger 109 169 - -
Dere05g0096 302 SUPERFAMILY Leucine zipper domain 116 171 IPR046347 GO:0003700|GO:0006355
Dere05g0096 302 Pfam Basic region leucine zipper 113 163 IPR004827 GO:0003700|GO:0006355
Dere05g0096 302 Coils Coil 181 201 - -
Dere05g0096 302 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 114 170 IPR004827 GO:0003700|GO:0006355
Dere05g0096 302 MobiDBLite consensus disorder prediction 42 67 - -
Dere05g0096 302 PANTHER BASIC LEUCINE ZIPPER 34 47 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0096 Dere-ChrDere05 1248542 1252123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0096 114 184 bZIP Transcription Factor Family AT3G58120 39.437 1.65e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere05g0096 bZIP_2 2.6e-09 CL0018